Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05524 and BSU36210

See Amino acid alignment / Visit BSNT_05524 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence dna-align/BSNT_05524___ywqH.1.22522.seq
#    -bsequence dna-align/BSU36210___ywqH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05524___ywqH-BSU36210___ywqH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05524___ywqH-BSU36210___ywqH.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05524___ywqH
# 2: BSU36210___ywqH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 434
# Identity:     382/434 (88.0%)
# Similarity:   382/434 (88.0%)
# Gaps:          22/434 ( 5.1%)
# Score: 1693.5
# 
#
#=======================================

BSNT_05524___      1 ATGGGTTATGAAAGTATGCTAGCGGATATCAAAAGTTCGCTCAACGGAAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw      1 ATGGGTTATGAAAGTATGCTAGCGGATATCAAAAGTTCGCTCAACGGAAA     50

BSNT_05524___     51 AATTTCCGACGTGGAAGACAAGATCGAAAAGCTGAAAAAAGCAAAAAAGG    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw     51 AATTTCAGACGTGGAAGACAAGATCGAAAAGCTGAAAAAAGCAAAAAAGG    100

BSNT_05524___    101 ACATAGACACACTGCAAGAAGAGGCAATCACTGAAATCAAAGAAATTGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw    101 ACATAGACACACTGCAAGAAGAGGCAATCACTGAAATCAAAGAAATTGTG    150

BSNT_05524___    151 AAACCGGAATTGGGCAAGCATTGGACGGGAACAAAAGCCGATGATTTCGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36210___yw    151 AAACCGGAATTGGGCAAGCATTGGACGGGAACAAAAGCCGATGATTTCGA    200

BSNT_05524___    201 CAAGGGAAGAGAAGAGGCGAAATCGGAAGCATCCAAGATTGTGAATGATA    250
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU36210___yw    201 CAAGGGAAGAGAAGAGGCGAAATCGGAAGCATCTAAGATTGTGAATGATA    250

BSNT_05524___    251 AATATAACGAGTATATGGCTTCGATTCAAAGCAAAATATTCTG-GCTTGA    299
                     ||||||||||||||||||||||||||.|..|.||||| ||.|| .|||||
BSU36210___yw    251 AATATAACGAGTATATGGCTTCGATTAACGGGAAAAT-TTTTGATCTTGA    299

BSNT_05524___    300 ----GACAGAG--AAATTTG-AGCTGAATTTGACAAAAAGTGC--AGCGA    340
                         ||.|.||  ||||.|| |.|.|||||         ||.|  |||.|
BSU36210___yw    300 ATGGGATAAAGCTAAATATGCATCGGAATT---------GTTCATAGCAA    340

BSNT_05524___    341 ATGCCGCAGGCGACCTTCTTGCTAAAGGAGAAGATTTCGTAGAAGAAGCA    390
                     |||..||||..||.||||||...||.||||||||.||||..|||||||..
BSU36210___yw    341 ATGGTGCAGCAGATCTTCTTAAAAAGGGAGAAGAGTTCGCGGAAGAAGTC    390

BSNT_05524___    391 GGAAGACA-AATTAGTAAACTAAAATGGTGGTGA    423
                     |||| |.| |||||||||||||||||||||||||
BSU36210___yw    391 GGAA-ATACAATTAGTAAACTAAAATGGTGGTGA    423


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