Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05531 and BSU36240

See Amino acid alignment / Visit BSNT_05531 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:29
# Commandline: needle
#    -asequence dna-align/BSNT_05531___ywqE.1.22522.seq
#    -bsequence dna-align/BSU36240___ywqE.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05531___ywqE-BSU36240___ywqE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05531___ywqE-BSU36240___ywqE.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05531___ywqE
# 2: BSU36240___ywqE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 765
# Identity:     757/765 (99.0%)
# Similarity:   757/765 (99.0%)
# Gaps:           0/765 ( 0.0%)
# Score: 3753.0
# 
#
#=======================================

BSNT_05531___      1 ATGATCGATATTCACTGTCACATTCTTCCCGCAATGGATGACGGGGCAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw      1 ATGATCGATATTCACTGTCACATTCTTCCCGCAATGGATGACGGGGCAGG     50

BSNT_05531___     51 TGATTCGGCCGACAGCATAGAAATGGCAAGAGCCGCTGTTCGTCAGGGAA    100
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU36240___yw     51 TGATTCGGCCGACAGCATAGAAATGGCAAGAGCAGCTGTTCGTCAGGGAA    100

BSNT_05531___    101 TCCGGACGATCATTGCGACACCTCATCATAACAACGGTGTGTATAAAAAC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    101 TCCGGACGATCATTGCGACACCTCATCATAACAACGGTGTGTATAAAAAC    150

BSNT_05531___    151 GAGCCAGCTGCAGTCAGAGAAGCAGCAGATCAGTTAAACAAACGTTTAAT    200
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    151 GAGCCAGCCGCAGTCAGAGAAGCAGCAGATCAGTTAAACAAACGTTTAAT    200

BSNT_05531___    201 CAAAGAAGACATTCCTTTACATGTGCTTCCGGGACAGGAAATCAGAATCT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    201 CAAAGAAGACATTCCTTTACATGTGCTTCCGGGACAGGAAATCAGAATCT    250

BSNT_05531___    251 ACGGCGAGGTGGAACAAGACCTTGCCAAACAGCAGCTGCTTTCGCTGAAT    300
                     ||||||||||||||||||||||||||||||..||||||||||||||||||
BSU36240___yw    251 ACGGCGAGGTGGAACAAGACCTTGCCAAACGTCAGCTGCTTTCGCTGAAT    300

BSNT_05531___    301 GATACAAAACACATCTTGATTGAGTTTCCGTTTGATCACGTTCCCCGATA    350
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    301 GATACAAAATACATCTTGATTGAGTTTCCGTTTGATCACGTTCCCCGATA    350

BSNT_05531___    351 TGCGGAGCAGCTTTTTTATGATTTGCAGCTGAAAGGATATATTCCGGTTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    351 TGCGGAGCAGCTTTTTTATGATTTGCAGCTGAAAGGATATATTCCGGTTA    400

BSNT_05531___    401 TCGCCCATCCTGAACGCAACAGGGAAATTCGCGAAAACCCGTCCTTGCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    401 TCGCCCATCCTGAACGCAACAGGGAAATTCGCGAAAACCCGTCCTTGCTG    450

BSNT_05531___    451 TATCATCTTGTGGAAAAAGGAGCAGCATCTCAGATTACTTCAGGAAGTCT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    451 TATCATCTTGTGGAAAAAGGAGCAGCATCTCAGATTACTTCAGGAAGTCT    500

BSNT_05531___    501 TGCGGGGACCTTCGGCAAGCAGCTGAAAGCATTTTCTCTCCGGCTGGTTG    550
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    501 TGCGGGGATCTTCGGCAAGCAGCTGAAAGCATTTTCTCTCCGGCTGGTTG    550

BSNT_05531___    551 AAGCCAATTTGATCCATTTCGTAGCCTCAGATGCCCATAATGTGAAAACG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    551 AAGCCAATTTGATCCATTTCGTAGCCTCAGATGCCCATAATGTGAAAACG    600

BSNT_05531___    601 AGAAATTTTCACACTCAAGAGGCCCTTTATGTTCTAGAGAAAGAATTCGG    650
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU36240___yw    601 AGAAATTTTCACACTCAAGAGGCTCTTTATGTTCTAGAGAAAGAATTCGG    650

BSNT_05531___    651 CTCGGAACTTCCTTATATGCTGACGGAAAATGCAGAGCTTCTCCTGCGGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    651 CTCGGAACTTCCTTATATGCTGACGGAAAATGCAGAGCTTCTCCTGCGGA    700

BSNT_05531___    701 ATCAGACCATCTTCAGACAGCCTCCGCAGCCGGTCAAAAGAAGAAAATTG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36240___yw    701 ATCAGACCATCTTCAGACAGCCTCCGCAGCCGGTCAAAAGAAGAAAATTG    750

BSNT_05531___    751 TTTGGTCTTTTTTAA    765
                     ||||||.||||||||
BSU36240___yw    751 TTTGGTTTTTTTTAA    765


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