Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05542 and BSU36310

See Amino acid alignment / Visit BSNT_05542 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:31
# Commandline: needle
#    -asequence dna-align/BSNT_05542___ywpH.1.22522.seq
#    -bsequence dna-align/BSU36310___ssbB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05542___ywpH-BSU36310___ssbB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05542___ywpH-BSU36310___ssbB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05542___ywpH
# 2: BSU36310___ssbB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 342
# Identity:     341/342 (99.7%)
# Similarity:   341/342 (99.7%)
# Gaps:           0/342 ( 0.0%)
# Score: 1701.0
# 
#
#=======================================

BSNT_05542___      1 ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36310___ss      1 ATGTTCAATCAGGTCATGCTTGTCGGACGTCTTACAAAAGATCCTGATCT     50

BSNT_05542___     51 TCGCTACACTTCCACCGGTGCGGCAGTTGCACATGTTACGCTCGCGGTGA    100
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU36310___ss     51 TCGCTACACTTCCGCCGGTGCGGCAGTTGCACATGTTACGCTCGCGGTGA    100

BSNT_05542___    101 ACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAAT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36310___ss    101 ACCGCAGCTTCAAGAATGCTTCAGGTGAAATCGAAGCTGATTACGTCAAT    150

BSNT_05542___    151 TGCACACTTTGGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36310___ss    151 TGCACACTTTGGAGAAAAACAGCTGAAAACACGGCGTTGTATTGCCAAAA    200

BSNT_05542___    201 AGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGAAGCTATGAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36310___ss    201 AGGTTCTCTCGTCGGCGTAAGCGGACGGATTCAGACAAGAAGCTATGAAA    250

BSNT_05542___    251 ACGAGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36310___ss    251 ACGAGGAAGGCGTTAACGTGTATGTAACAGAAGTGTTGGCTGACACTGTT    300

BSNT_05542___    301 CGTTTTATGGACCCTAAACCCCGGGAAAAAGCTGCTGATTGA    342
                     ||||||||||||||||||||||||||||||||||||||||||
BSU36310___ss    301 CGTTTTATGGACCCTAAACCCCGGGAAAAAGCTGCTGATTGA    342


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