Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05545 and BSU36320
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:26:31
# Commandline: needle
# -asequence dna-align/BSNT_05545.1.22522.seq
# -bsequence dna-align/BSU36320___ywpG.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05545-BSU36320___ywpG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05545-BSU36320___ywpG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05545
# 2: BSU36320___ywpG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 384
# Identity: 205/384 (53.4%)
# Similarity: 205/384 (53.4%)
# Gaps: 177/384 (46.1%)
# Score: 1007.0
#
#
#=======================================
BSNT_05545 1 ATGAATCAATTTCGTTTAAAAGAAATTTATATTGACGGCGCTCCTTCTGA 50
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU36320___yw 1 ATGAATCAATTTCGTTTAAAAGAAATTTATATTGACGGCGTTCCTTCTGA 50
BSNT_05545 51 AAGCCATTTGATTCAAAAGGAAGTAACATATATGTTAAGCCGTAAAGAAG 100
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU36320___yw 51 AAGTCATTTGATTCAAAAGGAAGTAACATATATGTTAAGCCGTAAAGAAG 100
BSNT_05545 101 TGTTTGAGGTTCATCTGAACAAAAAAGGAAGAATAAGTTTTTTATACGAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36320___yw 101 TGTTTGAGGTTCATCTGAACAAAAAAGGAAGAATAAGTTTTTTATACGAA 150
BSNT_05545 151 ACACAAGATGGCATGGAGCAGTATAAAATCAAGCTGTCAATGCCGG-AAA 199
|||||||||||||||||||||||||||||||||||||||||||||| |||
BSU36320___yw 151 ACACAAGATGGCATGGAGCAGTATAAAATCAAGCTGTCAATGCCGGAAAA 200
BSNT_05545 200 AAAATTGA------------------------------------------ 207
||||||||
BSU36320___yw 201 AAAATTGAGCTTTCAGTGGTTTGCGTGGGATGGCTCTTCCTATGTGCGCA 250
BSNT_05545 207 -------------------------------------------------- 207
BSU36320___yw 251 TGAATACGCAAAACTGGCTGACAAAGCAAATCTTTTTCCGTTTTTTAAAA 300
BSNT_05545 207 -------------------------------------------------- 207
BSU36320___yw 301 AGTACATATTTCTTCAAAGGAAAAAAGCAAAAGATGTTTTTAGCTGAAGG 350
BSNT_05545 207 ---------------------------------- 207
BSU36320___yw 351 AAAAATGAAAACGAAAGATAAAAACAGAGGCTGA 384
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