Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05619 and BSU36790

See Amino acid alignment / Visit BSNT_05619 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:38
# Commandline: needle
#    -asequence dna-align/BSNT_05619___ywmA.1.22522.seq
#    -bsequence dna-align/BSU36790___ywmA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05619___ywmA-BSU36790___ywmA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05619___ywmA-BSU36790___ywmA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05619___ywmA
# 2: BSU36790___ywmA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 508
# Identity:     468/508 (92.1%)
# Similarity:   468/508 (92.1%)
# Gaps:          35/508 ( 6.9%)
# Score: 2300.0
# 
#
#=======================================

BSNT_05619___      1 ATGGTATACTTTATTGGAAAGGAGCTGGCAAATGTGAATCATTCTTTTTT     50
                                                      |||||||||||||||||
BSU36790___yw      1 ---------------------------------GTGAATCATTCTTTTTT     17

BSNT_05619___     51 TCAGCCTGAAAAGCAATATGGTGAGGACCTGCCAATTTTTGATCAGGAAT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw     18 TCAGCCTGAAAAGCAATATGGTGAGGACCTGCCAATTTTTGATCAGGAAT     67

BSNT_05619___    101 GGGAAGCAATTGCATTCTATTATGATTATAGACAGTCACAGATTGAAGAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw     68 GGGAAGCAATTGCATTCTATTATGATTATAGACAGTCACAGATTGAAGAA    117

BSNT_05619___    151 CTGAATGAATTGTGTCAGTTTTTTAACATTTCTCTTACCTATACGAGAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw    118 CTGAATGAATTGTGTCAGTTTTTTAACATTTCTCTTACCTATACGAGAGA    167

BSNT_05619___    201 AAGCCTTGAAGAGCTTGAAAACCTTTATTTTCAAAGTATACAAGAGCTTT    250
                     ||||||||||||||||||||||||.||||||||||||||||||||.||||
BSU36790___yw    168 AAGCCTTGAAGAGCTTGAAAACCTCTATTTTCAAAGTATACAAGAACTTT    217

BSNT_05619___    251 TGCTTGCTGATTGGAATCTTCCTATTGAAGAATTCGAGAAAATGATCAGT    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw    218 TGCTTGCTGATTGGAATCTTCCTATTGAAGAATTCGAGAAAATGATCAGT    267

BSNT_05619___    301 GTTTATCTTATAGATTGCGTGATTGCCCGCCATGAAGATGCTGAATGGGT    350
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU36790___yw    268 GTTTATCTTATAGATTGTGTGATTGCCCGCCATGAAGATGCTGAATGGGT    317

BSNT_05619___    351 TGTAAAACCTTATCCCTATAAAGACGGCGCTTATACACTTGGCTTTAGAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw    318 TGTAAAACCTTATCCCTATAAAGACGGCGCTTATACACTTGGCTTTAGAA    367

BSNT_05619___    401 GACATCGCAAATCGTGGCATACAATGAATGCCTGTGATGGTTTATACCTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36790___yw    368 GACATCGCAAATCGTGGCATACAATGAATGCCTGTGATGGTTTATACCTG    417

BSNT_05619___    451 CG-CCAAGAAGAGGATCGCCCGCTGCTGTCGCTGTTTGATTCTCTTGTTC    499
                     || |||| ||||||||||||||.|||||||||||||||||||||||||.|
BSU36790___yw    418 CGTCCAA-AAGAGGATCGCCCGTTGCTGTCGCTGTTTGATTCTCTTGTGC    466

BSNT_05619___    500 GTTCATAA    507
                     ||||||||
BSU36790___yw    467 GTTCATAA    474


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