Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05648 and BSU36980

See Amino acid alignment / Visit BSNT_05648 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:41
# Commandline: needle
#    -asequence dna-align/BSNT_05648___ywlA.1.22522.seq
#    -bsequence dna-align/BSU36980___ywlA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05648___ywlA-BSU36980___ywlA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05648___ywlA-BSU36980___ywlA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05648___ywlA
# 2: BSU36980___ywlA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 363
# Identity:     357/363 (98.3%)
# Similarity:   357/363 (98.3%)
# Gaps:           0/363 ( 0.0%)
# Score: 1761.0
# 
#
#=======================================

BSNT_05648___      1 ATGAAATACAATTATACAGTGCTGTTATCAGCATTCACGATGTCCGTTCT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36980___yw      1 ATGAAATACAATTATACAGTGCTGTTATCAGCATTCACGATGTCCGTTCT     50

BSNT_05648___     51 TTATTCAGTAATTTATATTCATTCATTTATCATTGCCGCTCTCATCACAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36980___yw     51 TTATTCAGTAATTTATATTCATTCATTTATCATTGCCGCTCTCATCACAA    100

BSNT_05648___    101 TGGCATTTTATTTTCTGTTTCCTTATTTGATCTTCGCACTGCCGCTTCAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU36980___yw    101 TGGCATTTTATTTTCTGTTTCCTTATTTGATCTTCGCACTGCCGCTTCAA    150

BSNT_05648___    151 ATCATGATGAATAAAAAGCCGAAACGGTTCAGCCCTTTGTATCTGCTGTA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU36980___yw    151 ATCATGATGAATAAAAAGCCGAAACGTTTCAGCCCTTTGTATCTGCTGTA    200

BSNT_05648___    201 TTACCTTGCCGCTGCTTTTATTGCTAACGCGATCATTTTCGGCGTGCTTC    250
                     ||||||||||||||||||||||||.||||||||||||||||||.||||||
BSU36980___yw    201 TTACCTTGCCGCTGCTTTTATTGCCAACGCGATCATTTTCGGCATGCTTC    250

BSNT_05648___    251 AGCCTTCGGGACAATCTCTGTTTCAAAATACAGCCTTCTATCTTTTCGCT    300
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU36980___yw    251 AGCCTTCGGGACAATCTCTGTTTCAAAATACAGCCTTTTATCTTTTCGCT    300

BSNT_05648___    301 GTATTAACAGCTCTTATTTATTGGATATGGGACTCTGTTTTACTGCAAAA    350
                     |||||||||||||||||.||||||||||||||.|||||||||||||||||
BSU36980___yw    301 GTATTAACAGCTCTTATCTATTGGATATGGGATTCTGTTTTACTGCAAAA    350

BSNT_05648___    351 AAAGGAAGCCTAA    363
                     |||||||||||||
BSU36980___yw    351 AAAGGAAGCCTAA    363


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.