Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05707 and BSU37320

See Amino acid alignment / Visit BSNT_05707 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:49
# Commandline: needle
#    -asequence dna-align/BSNT_05707___narK.1.22522.seq
#    -bsequence dna-align/BSU37320___narK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05707___narK-BSU37320___narK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05707___narK-BSU37320___narK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05707___narK
# 2: BSU37320___narK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1188
# Identity:    1118/1188 (94.1%)
# Similarity:  1118/1188 (94.1%)
# Gaps:          60/1188 ( 5.1%)
# Score: 5550.0
# 
#
#=======================================

BSNT_05707___      0 --------------------------------------------------      0
                                                                       
BSU37320___na      1 ATGATCAACCGTCAACACATTCAATTATCGTTACAGTCATTAAGCTTGGT     50

BSNT_05707___      1 ----------ATGGTTTGGGTGCTGATTTCATCACTCATTTCCCAAATCA     40
                               ||||||||||||||||||||||||||||||||||||||||
BSU37320___na     51 GGCAGGGTTTATGGTTTGGGTGCTGATTTCATCACTCATTTCCCAAATCA    100

BSNT_05707___     41 CATTAGATATTCATTTAAGCAAGGGTGAGATTTCTTTAGTGACCGCGATT     90
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    101 CATTAGATATTCATTTAAGCAAGGGTGAGATTTCTTTAGTGACCGCGATT    150

BSNT_05707___     91 CCTGTGATCCTCGGGTCGCTTCTCCGCATTCCTTTAGGGTATTTAACGAA    140
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    151 CCTGTGATCCTCGGGTCGCTTCTCCGCATTCCTTTAGGGTATTTAACGAA    200

BSNT_05707___    141 CAGGTTTGGCGCGCGGCTCATGTTTATGGTCAGCTTCATCCTGCTTTTAT    190
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    201 CAGGTTTGGCGCGCGGCTCATGTTTATGGTCAGCTTCATCCTGCTTTTAT    250

BSNT_05707___    191 TTCCTGTATTTTGGATCAGTATCGCGGATTCTCTGTTTGATTTAATCGCA    240
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    251 TTCCTGTATTTTGGATCAGTATCGCGGATTCTCTGTTTGATTTAATCGCA    300

BSNT_05707___    241 GGCGGCTTTTTCTTAGGGATCGGGGGAGCGGTGTTTTCCATTGGAGTGAC    290
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU37320___na    301 GGCGGCTTTTTCTTAGGGATCGGGGGAGCGGTGTTTTCCATTGGGGTGAC    350

BSNT_05707___    291 CTCCCTCCCGAAATATTATCCGAAAGAAAAGCACGGTGTCGTCAATGGGA    340
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    351 CTCCCTCCCGAAATATTATCCGAAAGAAAAGCACGGTGTCGTCAATGGGA    400

BSNT_05707___    341 TTTACGGTGCAGGAAATATCGGGACAGCCGTTACGACATTTGCAGCGCCG    390
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    401 TTTACGGTGCAGGAAATATCGGGACAGCCGTTACGACATTTGCAGCGCCG    450

BSNT_05707___    391 GTTATCGCTCAAGCCGTCGGGTGGAAATCAACCGTGCAGATGTATCTGAT    440
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU37320___na    451 GTTATCGCTCAAGCCGTCGGGTGGAAATCAACCGTGCAAATGTATCTGAT    500

BSNT_05707___    441 TTTGCTGGCTGTCTTTGCCTTACTGCACGTGTTGTTTGGCGACAGGCATG    490
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU37320___na    501 TTTGCTGGCTGTCTTTGCCTTACTGCACGTATTGTTTGGCGACAGGCATG    550

BSNT_05707___    491 AGAAGAAGGTCAAAGTTTCTGTTAAGACTCAAATCAAAGCCGTTTACCGA    540
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU37320___na    551 AGAAGAAGGTCAAAGTTTCTGTTAAGACTCAAATCAAAGCTGTTTACCGA    600

BSNT_05707___    541 AATCATGTGCTATGGTTTCTGAGCCTGTTTTATTTTATTACGTTCGGTGC    590
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    601 AATCATGTGCTATGGTTTCTGAGCCTGTTTTATTTTATTACGTTCGGTGC    650

BSNT_05707___    591 CTTTGTCGCCTTCACTATCTATCTGCCGAACTTTCTGGTGGAGCATTTTG    640
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    651 CTTTGTCGCCTTCACTATCTATCTGCCGAACTTTCTGGTGGAGCATTTTG    700

BSNT_05707___    641 GGCTGAATCCTGCAGATGCCGGCTTGCGGACGGCTGGCTTTATTGCGGTT    690
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    701 GGCTGAATCCTGCAGATGCCGGCTTGCGGACGGCTGGCTTTATTGCGGTT    750

BSNT_05707___    691 TCTACGCTGCTCAGGCCTGCAGGCGGATTCCTGGCTGATAAAATGAGCCC    740
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU37320___na    751 TCTACGCTGCTCAGGCCTGCGGGCGGATTCCTGGCTGATAAAATGAGCCC    800

BSNT_05707___    741 GCTCCGCATCTTGATGTTTGTTTTTGCCGGGCTTACATTATCAGGCATTA    790
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    801 GCTCCGCATCTTGATGTTTGTTTTTGCCGGGCTTACATTATCAGGCATTA    850

BSNT_05707___    791 TCCTATCATTCTCGCCGACAATCGGCCTTTATACGTTTGGATCATTAACC    840
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU37320___na    851 TCCTATCGTTCTCGCCGACAATCGGCCTTTATACGTTTGGATCATTAACC    900

BSNT_05707___    841 GTGGCTGTCTGCTCAGGCATAGGAAACGGGACTGTTTTTAAACTGGTGCC    890
                     |||||.|||||||||||||||||||||||.||||||||||||||||||||
BSU37320___na    901 GTGGCCGTCTGCTCAGGCATAGGAAACGGAACTGTTTTTAAACTGGTGCC    950

BSNT_05707___    891 TTTCTATTTTTCCAAGCAAGCGGGGATTGCCAATGGGATTGTGTCTGCCA    940
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU37320___na    951 TTTCTATTTTTCGAAGCAAGCGGGGATTGCCAATGGGATTGTGTCTGCCA   1000

BSNT_05707___    941 TGGGCGGATTAGGCGGCTTTTTTCCTCCGCTCATATTGGCGAGTGTATTT    990
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU37320___na   1001 TGGGCGGTTTAGGCGGCTTTTTTCCTCCGCTCATATTGGCGAGTGTATTT   1050

BSNT_05707___    991 CAGGCAACAGGCCAGTACGCGATCGGGTTTATGGCGCTTTCAGAGGTGGC   1040
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na   1051 CAGGCAACAGGCCAGTACGCGATCGGGTTTATGGCGCTTTCAGAGGTGGC   1100

BSNT_05707___   1041 GTTAGCCAGTTTTGTCCTTGTCATATGGATGTATTGGCAGGAAAGAATGA   1090
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37320___na   1101 GTTAGCCAGTTTTGTCCTTGTCATATGGATGTATTGGCAGGAAAGAATGA   1150

BSNT_05707___   1091 AAACACACACGGAGAGAAACAGCCAGAGCATCAACTAA   1128
                     ||||||||||||||||||||||||||||||||||||||
BSU37320___na   1151 AAACACACACGGAGAGAAACAGCCAGAGCATCAACTAA   1188


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