Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05756 and BSU37620

See Amino acid alignment / Visit BSNT_05756 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:26:55
# Commandline: needle
#    -asequence dna-align/BSNT_05756___rsfA.1.22522.seq
#    -bsequence dna-align/BSU37620___rsfA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05756___rsfA-BSU37620___rsfA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05756___rsfA-BSU37620___rsfA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05756___rsfA
# 2: BSU37620___rsfA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 777
# Identity:     773/777 (99.5%)
# Similarity:   773/777 (99.5%)
# Gaps:           0/777 ( 0.0%)
# Score: 3849.0
# 
#
#=======================================

BSNT_05756___      1 ATGACAAAACAGCGACAAGACGCTTGGTCAGAGGAAAACGATCTGCTTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs      1 ATGACAAAACAGCGACAAGACGCTTGGTCAGAGGAAAACGATCTGCTTTT     50

BSNT_05756___     51 AGCCGAAACAGTGCTTCGGCATGTGAGGGAGGGCAGCACTCAGCTGAACG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs     51 AGCCGAAACAGTGCTTCGGCATGTGAGGGAGGGCAGCACTCAGCTGAACG    100

BSNT_05756___    101 CCTTTGAAGAAGTCGGCGATAAATTAAACCGGACATCCGCAGCCTGCGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    101 CCTTTGAAGAAGTCGGCGATAAATTAAACCGGACATCCGCAGCCTGCGGA    150

BSNT_05756___    151 TTCAGATGGAACGCAGTGGTCCGCCATCAATATGAAAAAGCGCTTCAGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    151 TTCAGATGGAACGCAGTGGTCCGCCATCAATATGAAAAAGCGCTTCAGCT    200

BSNT_05756___    201 TGCGAAGAAACAACGAAAACAGCGGATGAGAGCGCTCGGAAACGGGCAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    201 TGCGAAGAAACAACGAAAACAGCGGATGAGAGCGCTCGGAAACGGGCAGC    250

BSNT_05756___    251 CCGCGAAAAAAAGATTATTATATCAGCCTCCTGCCGTTGATCCTGAAATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    251 CCGCGAAAAAAAGATTATTATATCAGCCTCCTGCCGTTGATCCTGAAATC    300

BSNT_05756___    301 ATTCAAGAAACCGCTGCAGAAGAGCCGGTTAAAACGGAAACACCTTCTGT    350
                     ||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU37620___rs    301 ATTCAAGAAACCGCTGCAGAAGAGCCGGTTAAAACGGAAACACCATCTGT    350

BSNT_05756___    351 CGAAAATGAGCAACCTTTAATGTCTGGCGAACATATGCCTTTTGTTGATG    400
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU37620___rs    351 CGAAAATGAGCAACCTTTAATGTCTGGCGAACACATGCCTTTTGTTGATG    400

BSNT_05756___    401 AAAGCTTTAAGGAAGAGTTAGCTAGTCTATCACACTTATTGTCTCCTCAA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    401 AAAGCTTTAAGGAAGAGTTAGCTAGTCTATCACACTTATTGTCTCCTCAA    450

BSNT_05756___    451 ACACCTGCAGCTGCGCCTGAGATGACGATGAATGATGTGATCCGCTTCCT    500
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    451 ACGCCTGCAGCTGCGCCTGAGATGACGATGAATGATGTGATCCGCTTCCT    500

BSNT_05756___    501 GCAGAATTACGAAGGCAATAACGAGCAATCATCAGCATTAAAAATGGAAA    550
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU37620___rs    501 GCAGAATTACGAAGGCAATCACGAGCAATCATCAGCATTAAAAATGGAAA    550

BSNT_05756___    551 ACGAGCGTTTAAAGAAAGAAAATCAGGAATTGCAAAACAAAACAGAGCAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    551 ACGAGCGTTTAAAGAAAGAAAATCAGGAATTGCAAAACAAAACAGAGCAG    600

BSNT_05756___    601 CTAGAGGCAGAAGTTCAAAAGCTTGAAAAAGACCAAAAAACGATCCAAGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    601 CTAGAGGCAGAAGTTCAAAAGCTTGAAAAAGACCAAAAAACGATCCAAGA    650

BSNT_05756___    651 AGATTATGAAACCTTGGTGAAAATTATGAACAGAGCCAGAAAGCTAGTTT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    651 AGATTATGAAACCTTGGTGAAAATTATGAACAGAGCCAGAAAGCTAGTTT    700

BSNT_05756___    701 TATTTGAAGAAGATGAACATGCCTCTCCGTCCTTCAAAATGGACCGGAAC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37620___rs    701 TATTTGAAGAAGATGAACATGCCTCTCCGTCCTTCAAAATGGACCGGAAC    750

BSNT_05756___    751 GGCAATTTAGAAAAATTAGCGGAATGA    777
                     |||||||||||||||||||||||||||
BSU37620___rs    751 GGCAATTTAGAAAAATTAGCGGAATGA    777


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