Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05809 and BSU37950
See
Amino acid alignment /
Visit
BSNT_05809 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:01
# Commandline: needle
# -asequence dna-align/BSNT_05809___ywdI.1.22522.seq
# -bsequence dna-align/BSU37950___ywdI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05809___ywdI-BSU37950___ywdI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05809___ywdI-BSU37950___ywdI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05809___ywdI
# 2: BSU37950___ywdI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 357
# Identity: 311/357 (87.1%)
# Similarity: 311/357 (87.1%)
# Gaps: 39/357 (10.9%)
# Score: 1527.0
#
#
#=======================================
BSNT_05809___ 1 ---------------------------------------ATGAACATTCA 11
|||||||||||
BSU37950___yw 1 ATGCAGGAAGACAACATTTATTTTTTTGGAGGGTGCTTCATGAACATTCA 50
BSNT_05809___ 12 TATATCTGCATTAATTCAAAAGATGGAAGAGGAGCTGAAAAAAGCAAAAA 61
|||||||||.||.|||||||||||||||||.|||||.|||||||||||||
BSU37950___yw 51 TATATCTGCTTTGATTCAAAAGATGGAAGAAGAGCTAAAAAAAGCAAAAA 100
BSNT_05809___ 62 CAGCTGAACGGGATGAGGAGCTGAAGCGTTATGTAGCGGTTGTCCGTTCT 111
|.||||||||||||||||||||||||||||||||||||||||||||||||
BSU37950___yw 101 CGGCTGAACGGGATGAGGAGCTGAAGCGTTATGTAGCGGTTGTCCGTTCT 150
BSNT_05809___ 112 CTGTGTGATGTCGTGCTTGATCAGCCGGAGAACGTGAGCGCGCCCCGCAT 161
||||||||||||||||||||||||||||||||||.|||||||||||||||
BSU37950___yw 151 CTGTGTGATGTCGTGCTTGATCAGCCGGAGAACGCGAGCGCGCCCCGCAT 200
BSNT_05809___ 162 ACAGCCGAGCGTTACGCCAAGTCCCGCCGCGCCGCCATCGACAGACCAGC 211
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37950___yw 201 ACAGCCGAGCGTTACGCCAAGTCCCGCCGCGCCGCCATCGACAGACCAGC 250
BSNT_05809___ 212 TGATGATGGAAAAAATGATGGGGAGCGCGGGATTAAACAAATTTCGAAAG 261
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU37950___yw 251 TGATGATGGAAAAAATGATGGGGAGCGCGGGATTAAACAAATATCGAAAG 300
BSNT_05809___ 262 CAAGAAAAAGAGAAGCAGGAAGAGGATGGAAACGGAGAGTCTTTATTTGA 311
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU37950___yw 301 CAAGAAAAAGAGAAGCAGGAAGAGGATGGAAACGGAGAGTCTTTATTTGA 350
BSNT_05809___ 312 TTTTTAA 318
|||||||
BSU37950___yw 351 TTTTTAA 357
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.