Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05821 and BSU38070
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:03
# Commandline: needle
# -asequence dna-align/BSNT_05821.1.22522.seq
# -bsequence dna-align/BSU38070___sacT.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05821-BSU38070___sacT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05821-BSU38070___sacT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05821
# 2: BSU38070___sacT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 831
# Identity: 486/831 (58.5%)
# Similarity: 486/831 (58.5%)
# Gaps: 342/831 (41.2%)
# Score: 2418.0
#
#
#=======================================
BSNT_05821 0 -------------------------------------------------- 0
BSU38070___sa 1 TTGAAAATCTATAAAGTATTAAACAACAATGCGGCTTTAATAAAAGAGGA 50
BSNT_05821 0 -------------------------------------------------- 0
BSU38070___sa 51 TGATCAGGAAAAAATCGTGATGGGACCGGGAATCGCTTTTCAAAAAAAGA 100
BSNT_05821 0 -------------------------------------------------- 0
BSU38070___sa 101 AAAATGATCTCATCCCTATGAATAAAGTGGAAAAGATCTTTGTCGTGCGC 150
BSNT_05821 0 -------------------------------------------------- 0
BSU38070___sa 151 GACGAGAATGAAAAGTTCAAACAAATCCTGCAAACACTGCCGGAGGAGCA 200
BSNT_05821 0 -------------------------------------------------- 0
BSU38070___sa 201 TATAGAAATAGCTGAGGATATCATCAGCTATGCGGAAGGAGAGCTCGCGG 250
BSNT_05821 0 -------------------------------------------------- 0
BSU38070___sa 251 CGCCGCTGAGCGATCACATTCATATCGCGCTTTCCGACCATTTGTCCTTT 300
BSNT_05821 1 ------------------------------------------TTGCTGCA 8
||||||||
BSU38070___sa 301 GCGATCGAAAGGATTCAAAATGGGCTGCTTGTGCAGAATAAATTGCTGCA 350
BSNT_05821 9 TGAGATAAAGGCGCTCTATAAAAAAGAATATGAGATCGGCCTGTGGGCGA 58
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 351 TGAGATAAAGGCGCTCTATAAAAAAGAATATGAGATCGGCCTGTGGGCGA 400
BSNT_05821 59 TCGGACATGTAAAAGAGACATTGGGCATGTCTCTGCCTGAAGATGAAGCG 108
||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38070___sa 401 TCGGACATGTAAAAGAGACATTGGGCGTGTCTCTGCCTGAAGATGAAGCG 450
BSNT_05821 109 GGTTATATTGCCCTTCACATCCATACGGCGAAGATGGATGCGGAGAGCAT 158
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 451 GGTTATATTGCCCTTCACATCCATACGGCGAAGATGGATGCGGAGAGCAT 500
BSNT_05821 159 GTATTCGGCGCTGAAGCATACGACCATGATCAAAGAAATGATAGAGAAAA 208
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 501 GTATTCAGCGCTGAAGCATACGACCATGATCAAAGAAATGATAGAGAAAA 550
BSNT_05821 209 TAGAACAATACTTTAATCGAAAGGTGGATGAAAACAGCATTTCCTATCAA 258
||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 551 TAAAACAATACTTTAATCGAAAGGTGGATGAAAACAGCATTTCCTATCAA 600
BSNT_05821 259 CGCCTTGTCACGCATTTGCGATACGCGGTCAGCCGGTTGGAATCAAATGA 308
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 601 CGCCTTGTCACGCATTTGCGATACGCGGTCAGCCGGTTGGAATCAAATGA 650
BSNT_05821 309 AGCGCTCCATCGTATGGACGAGGAGATGCTTTATTTCATCCAAAAAAAGT 358
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 651 AGCGCTCCATCGTATGGACGAGGAGATGCTTTATTTCATCCAAAAAAAGT 700
BSNT_05821 359 ATTCATTCGCCTATCAATGTGCGCTGGAGCTGGCGGAGTTTTTGAAAAAT 408
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 701 ATTCATTCGCCTATCAATGTGCGCTGGAGCTGGCGGAGTTTTTGAAAAAT 750
BSNT_05821 409 GAATATCAATTACATTTGCCGGAATCCGAGGCCGGCTATATCACGCTGCA 458
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38070___sa 751 GAATATCAATTACATTTGCCGGAATCCGAGGCCGGCTATATCACGCTGCA 800
BSNT_05821 459 TGTCCAGCGTCTTCAAGATCTCTCGGAATAA 489
|||||||||||||||||||||||||||||||
BSU38070___sa 801 TGTCCAGCGTCTTCAAGATCTCTCGGAATAA 831
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