Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05825 and BSU38090

See Amino acid alignment / Visit BSNT_05825 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence dna-align/BSNT_05825___vpr.1.22522.seq
#    -bsequence dna-align/BSU38090___vpr.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05825___vpr-BSU38090___vpr.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05825___vpr-BSU38090___vpr.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05825___vpr
# 2: BSU38090___vpr
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 2421
# Identity:    2393/2421 (98.8%)
# Similarity:  2393/2421 (98.8%)
# Gaps:           0/2421 ( 0.0%)
# Score: 11853.0
# 
#
#=======================================

BSNT_05825___      1 TTGAAAAAGGGGATCATTCGCTTTCTGCTTGTAAGTTTTGTCTTATTTTT     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38090___vp      1 TTGAAAAAGGGGATCATTCGCTTTCTGCTTGTAAGTTTCGTCTTATTTTT     50

BSNT_05825___     51 TGCGTTATCCACAGGTATTACGGGCGTCCAGGCAGCTCCGGCTTCTTCAA    100
                     |||||||||||||||.|||||||||||.||||||||||||||||||||||
BSU38090___vp     51 TGCGTTATCCACAGGCATTACGGGCGTTCAGGCAGCTCCGGCTTCTTCAA    100

BSNT_05825___    101 AAACGTCGGCTGATCTGGAAAAAGCCGAGGTATTCGGTGATATCGACATG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38090___vp    101 AAACGTCGGCTGATCTGGAAAAAGCCGAGGTATTCGGTGATATCGATATG    150

BSNT_05825___    151 ACGACAAGCAAAAAAACAACCGTTATAGTGGAATTAAAAGAAAAATCCTT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    151 ACGACAAGCAAAAAAACAACCGTTATAGTGGAATTAAAAGAAAAATCCTT    200

BSNT_05825___    201 GGCAGAAGCGAAGGAAGCGGGAGAAAGCCAATCGAAAAGCAAGCTGAAAA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    201 GGCAGAAGCGAAGGAAGCGGGAGAAAGCCAATCGAAAAGCAAGCTGAAAA    250

BSNT_05825___    251 CCGCTCGCACCAAAGCAAAAAATAAAGCAATCAAAGCGGTGAAAAACGGA    300
                     ||||||||||||||||||||||.||||||||||||||.||||||||||||
BSU38090___vp    251 CCGCTCGCACCAAAGCAAAAAACAAAGCAATCAAAGCAGTGAAAAACGGA    300

BSNT_05825___    301 AAAGTAAACCGGGAATATGAGCAGGTATTCTCAGGCTTCTCTATGAAGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    301 AAAGTAAACCGGGAATATGAGCAGGTATTCTCAGGCTTCTCTATGAAGCT    350

BSNT_05825___    351 TCCAGCTAATGAGATTCCAAAACTTCTCGCGGTAAAAGACGTTAAGGCGG    400
                     |||||||||||||||||||||||||||.||||||||||||||||||||.|
BSU38090___vp    351 TCCAGCTAATGAGATTCCAAAACTTCTAGCGGTAAAAGACGTTAAGGCAG    400

BSNT_05825___    401 TGTACCCGAACGTCACATATAAAACAGACAATATGAAGGATAAAGACGTC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    401 TGTACCCGAACGTCACATATAAAACAGACAATATGAAGGATAAAGACGTC    450

BSNT_05825___    451 ACAATCTCCGAAGACGCCGTATCTCCGCAAATGGATGACAGTGCGCCTTA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    451 ACAATCTCCGAAGACGCCGTATCTCCGCAAATGGATGACAGTGCGCCTTA    500

BSNT_05825___    501 TATCGGAGCAAACGATGCATGGGATTTAGGCTACACAGGAAAAGGCATTA    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU38090___vp    501 TATCGGAGCAAACGATGCATGGGATTTAGGCTACACAGGAAAAGGCATCA    550

BSNT_05825___    551 AGGTGGCGATTATTGACACTGGGGTTGAATACAATCACCCAGATCTGAAG    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    551 AGGTGGCGATTATTGACACTGGGGTTGAATACAATCACCCAGATCTGAAG    600

BSNT_05825___    601 AAAAACTTTGGACAATATAAAGGATACGATTTTGTGGACAATGATTACGA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    601 AAAAACTTTGGACAATATAAAGGATACGATTTTGTGGACAATGATTACGA    650

BSNT_05825___    651 TCCAAAAGAAACACCAACAGGCGATCCGAGGGGCGGAGCGACTGACCACG    700
                     ||||||||||||||||||.||||||||||||||||..||.||||||||.|
BSU38090___vp    651 TCCAAAAGAAACACCAACCGGCGATCCGAGGGGCGAGGCAACTGACCATG    700

BSNT_05825___    701 GCACACACGTAGCCGGAACTGTGGCTGCAAACGGAACAATTAAAGGCGTA    750
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38090___vp    701 GCACACACGTAGCCGGAACTGTGGCTGCAAACGGAACGATTAAAGGCGTA    750

BSNT_05825___    751 GCGCCTGATGCCACACTTCTTGCTTATCGTGTGTTAGGGCCTGGCGGAAG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    751 GCGCCTGATGCCACACTTCTTGCTTATCGTGTGTTAGGGCCTGGCGGAAG    800

BSNT_05825___    801 CGGCACATCGGAAAACGTCATCGCCGGTGTGGAACGTGCAGTGCAGGACG    850
                     |||||||.||||||||||||||||.||.||||||||||||||||||||||
BSU38090___vp    801 CGGCACAACGGAAAACGTCATCGCGGGCGTGGAACGTGCAGTGCAGGACG    850

BSNT_05825___    851 GGGCAGATGTGATGAACCTGTCTCTCGGAAACTCTTTAAACAACCCGGAC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    851 GGGCAGATGTGATGAACCTGTCTCTCGGAAACTCTTTAAACAACCCGGAC    900

BSNT_05825___    901 TGGGCGACAAGCACAGCGCTTGACTGGGCCATGTCAGAAGGCGTTGTCGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    901 TGGGCGACAAGCACAGCGCTTGACTGGGCCATGTCAGAAGGCGTTGTCGC    950

BSNT_05825___    951 TGTTACCTCAAACGGCAACAGCGGACCGAACGGCTGGACAGTCGGATCGC   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp    951 TGTTACCTCAAACGGCAACAGCGGACCGAACGGCTGGACAGTCGGATCGC   1000

BSNT_05825___   1001 CGGGCACATCCAGAGAAGCGATTTCTGTCGGTGCGACTCAGCTGCCGCTC   1050
                     ||||||||||.|||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1001 CGGGCACATCAAGAGAAGCGATTTCTGTCGGTGCGACTCAGCTGCCGCTC   1050

BSNT_05825___   1051 AATGAATACGCCGTCACTTTCGGCTCCTATTCTTCAGCAAAAGTGATGGG   1100
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38090___vp   1051 AATGAATACGCCGTCACTTTCGGCTCCTACTCTTCAGCAAAAGTGATGGG   1100

BSNT_05825___   1101 CTATAACAAAGAGGACGACGTCAAAGCGCTCAATAACAAAGAAGTTGAGC   1150
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1101 CTACAACAAAGAGGACGACGTCAAAGCGCTCAATAACAAAGAAGTTGAGC   1150

BSNT_05825___   1151 TTGTCGAAGCGGGAATCGGCGAAGCAAAGGATTTTGAAGGGAAAGACCTG   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1151 TTGTCGAAGCGGGAATCGGCGAAGCAAAGGATTTTGAAGGGAAAGACCTG   1200

BSNT_05825___   1201 ACAGGCAAAGTCGCCGTTGTCAAACGAGGCAGCATTGCATTTGTGGATAA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1201 ACAGGCAAAGTCGCCGTTGTCAAACGAGGCAGCATTGCATTTGTGGATAA   1250

BSNT_05825___   1251 AGCGGATAACGCTAAAAAAGCCGGTGCCATCGGCATGGTTGTGTATAACA   1300
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38090___vp   1251 AGCGGATAACGCTAAAAAAGCCGGTGCAATCGGCATGGTTGTGTATAACA   1300

BSNT_05825___   1301 ATCTCTCTGGAGAAATTGAAGCCAATGTGCCAGGCATGTCTGTCCCAACG   1350
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1301 ACCTCTCTGGAGAAATTGAAGCCAATGTGCCAGGCATGTCTGTCCCAACG   1350

BSNT_05825___   1351 ATTAAGCTTTCATTAGAAGACGGCGAAAAACTCGTCAGCGCCCTGAAAGC   1400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1351 ATTAAGCTTTCATTAGAAGACGGCGAAAAACTCGTCAGCGCCCTGAAAGC   1400

BSNT_05825___   1401 TGGTGAGACAAAAACAACATTCAAGTTGACGGTCTCAAAAGCGCTCGGTG   1450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1401 TGGTGAGACAAAAACAACATTCAAGTTGACGGTCTCAAAAGCGCTCGGTG   1450

BSNT_05825___   1451 AACAAGTCGCTGATTTCTCATCACGCGGTCCTGTTATGGATACGTGGATG   1500
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38090___vp   1451 AACAAGTCGCTGATTTCTCATCACGCGGCCCTGTTATGGATACGTGGATG   1500

BSNT_05825___   1501 ATTAAGCCTGATATTTCCGCGCCAGGGGTCAATATCGTGAGCACGATCCC   1550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1501 ATTAAGCCTGATATTTCCGCGCCAGGGGTCAATATCGTGAGCACGATCCC   1550

BSNT_05825___   1551 AACACACGATCCTGACCATCCATACGGCTACGGATCAAAACAAGGAACAA   1600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1551 AACACACGATCCTGACCATCCATACGGCTACGGATCAAAACAAGGAACAA   1600

BSNT_05825___   1601 GCATGGCATCGCCTCATATTGCCGGAGCGGTTGCCGTTATTAAACAAGCC   1650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1601 GCATGGCATCGCCTCATATTGCCGGAGCGGTTGCCGTTATTAAACAAGCC   1650

BSNT_05825___   1651 AAACCAAAGTGGAGCGTTGAACAGATTAAAACCGCCATCATGAATACCGC   1700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU38090___vp   1651 AAACCAAAGTGGAGCGTTGAACAGATTAAAGCCGCCATCATGAATACCGC   1700

BSNT_05825___   1701 TGTCACTTTAAAGGATAGCGATGGGGAAGTATATCCGCATAACGCTCAAG   1750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1701 TGTCACTTTAAAGGATAGCGATGGGGAAGTATATCCGCATAACGCTCAAG   1750

BSNT_05825___   1751 GCGCAGGCAGCGCAAGAATCATGAACGCAATCAAAGCCGATTCGCTCGTC   1800
                     |||||||||||||||||||.||||||||||||||||||||||||||||||
BSU38090___vp   1751 GCGCAGGCAGCGCAAGAATTATGAACGCAATCAAAGCCGATTCGCTCGTC   1800

BSNT_05825___   1801 TCACCTGGAAGCTATTCATACGGCACGTTCTTGAAGGAAAACGGAAACGA   1850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1801 TCACCTGGAAGCTATTCATACGGCACGTTCTTGAAGGAAAACGGAAACGA   1850

BSNT_05825___   1851 AACAAAAAATGAAACGTTTACGATTGAAAATCAATCTTCCATTAGAAAGT   1900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1851 AACAAAAAATGAAACGTTTACGATTGAAAATCAATCTTCCATTAGAAAGT   1900

BSNT_05825___   1901 CTTACACACTTGAATACTCATTTAATGGCAGCGGCATTTCCACATCCGGC   1950
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1901 CATACACACTTGAATACTCATTTAATGGCAGCGGCATTTCCACATCCGGC   1950

BSNT_05825___   1951 ACAAGCCGTGTTGTGATTCCGGCACATCAAACCGGGAAAGCCACTGCAAA   2000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   1951 ACAAGCCGTGTTGTGATTCCGGCACATCAAACCGGGAAAGCCACTGCAAA   2000

BSNT_05825___   2001 AGTAAAGGTCAATACGAAGAAAACAAAAGCTGGCACCTATGAAGGAACGG   2050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2001 AGTAAAGGTCAATACGAAGAAAACAAAAGCTGGCACCTATGAAGGAACGG   2050

BSNT_05825___   2051 TTATCGTCAGAGAAGGCGGAAAAACGGTCGCTAAGGTACCTACATTGCTG   2100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2051 TTATCGTCAGAGAAGGCGGAAAAACGGTCGCTAAGGTACCTACATTGCTG   2100

BSNT_05825___   2101 ATTGTGAAAGAGCCCGATTATCCGAGAGTCACATCTGTCTCTGTCAGCGA   2150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2101 ATTGTGAAAGAGCCCGATTATCCGAGAGTCACATCTGTCTCTGTCAGCGA   2150

BSNT_05825___   2151 AGGGTCTGTACAAGGTACCTATCAAATTGAAACCTACCTTCCTGCGGGAG   2200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2151 AGGGTCTGTACAAGGTACCTATCAAATTGAAACCTACCTTCCTGCGGGAG   2200

BSNT_05825___   2201 CGGAAGAGCTGGCGTTCCTCGTCTATGACAGCAACCTTGATTTCGCAGGC   2250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2201 CGGAAGAGCTGGCGTTCCTCGTCTATGACAGCAACCTTGATTTCGCAGGC   2250

BSNT_05825___   2251 CAAGCCGGCATTTATAAAAACCAAGATAAAGGTTACCAGTACTTTGACTG   2300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2251 CAAGCCGGCATTTATAAAAACCAAGATAAAGGTTACCAGTACTTTGACTG   2300

BSNT_05825___   2301 GGACGGCACGATTAATGGCGGAACCAAACTTCCGGCCGGAGAGTATTACT   2350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2301 GGACGGCACGATTAATGGCGGAACCAAACTTCCGGCCGGAGAGTATTACT   2350

BSNT_05825___   2351 TGCTCGCATATGCCGCGAACAAAGGCAAGTCAAGCCAGGTTTTGACCGAA   2400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38090___vp   2351 TGCTCGCATATGCCGCGAACAAAGGCAAGTCAAGCCAGGTTTTGACCGAA   2400

BSNT_05825___   2401 GAACCTTTCACTGTGGAATAA   2421
                     ||||||||||||||.||||||
BSU38090___vp   2401 GAACCTTTCACTGTTGAATAA   2421


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