Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05826 and BSU38100

See Amino acid alignment / Visit BSNT_05826 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:04
# Commandline: needle
#    -asequence dna-align/BSNT_05826___ywcH.1.22522.seq
#    -bsequence dna-align/BSU38100___ywcH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05826___ywcH-BSU38100___ywcH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05826___ywcH-BSU38100___ywcH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05826___ywcH
# 2: BSU38100___ywcH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1002
# Identity:     991/1002 (98.9%)
# Similarity:   991/1002 (98.9%)
# Gaps:           0/1002 ( 0.0%)
# Score: 4911.0
# 
#
#=======================================

BSNT_05826___      1 ATGGTTTCATTAAGTATATTAGATCAATCTCCAGTATCAGAGGGCAGCAA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw      1 ATGGTTTCATTAAGTATATTAGATCAATCTCCAGTATCAGAGGGCAGCAA     50

BSNT_05826___     51 TGCAGAAACGGCCTTACAGCAAACCGTTGCGCTTGCCCAAGCTGCTGAGG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw     51 TGCAGAAACGGCCTTACAGCAAACCGTTGCGCTTGCCCAAGCTGCTGAGG    100

BSNT_05826___    101 ACCTTGGATATAAGAGATTTTGGGTTTCTGAGCATCACTTTTCAAAACGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    101 ACCTTGGATATAAGAGATTTTGGGTTTCTGAGCATCACTTTTCAAAACGG    150

BSNT_05826___    151 CTGGCAGGGTCCAGTCCTGAGGTGCTAATCAGTCATATAGCGGCGAAAAC    200
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU38100___yw    151 CTGGCAGGGTCCAGTCCTGAGGTGCTAATCAGTCATATAGCAGCGAAAAC    200

BSNT_05826___    201 AAAGCGAATCCGTGTTGGATCAGGAGGAGTCATGCTGCCGCATTACAGTG    250
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    201 AAAGCGAATTCGTGTTGGATCAGGAGGAGTCATGCTGCCGCATTACAGTG    250

BSNT_05826___    251 CTTATAAAGTAGCTGAAAACTTTCGTGTTCTGGAGGGGCTGACACCAGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    251 CTTATAAAGTAGCTGAAAACTTTCGTGTTCTGGAGGGGCTGACACCAGGA    300

BSNT_05826___    301 AGAATTGACCTGGGGCTTGGCAGAGCACCGGGGGGAATGCCGATTGCATC    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    301 AGAATTGACCTGGGGCTTGGCAGAGCACCGGGGGGAATGCCGATTGCATC    350

BSNT_05826___    351 ATGGGCGCTGAATGACGGCGGTAAGCGCAATGCTGATCAGTATCCGCAGC    400
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38100___yw    351 ATGGGCGCTGAATGACGGTGGTAAGCGCAATGCTGATCAGTATCCGCAGC    400

BSNT_05826___    401 AAATCAAGGAGCTGACCATGTATTTGCATGATTTGGCGGATGATAAACAC    450
                     ||||.||||||||||||||||||||||||||||||||||||||.||||||
BSU38100___yw    401 AAATTAAGGAGCTGACCATGTATTTGCATGATTTGGCGGATGACAAACAC    450

BSNT_05826___    451 CGTTTTCCGAATCTGACCGCTGCGCCGCATATTTCAACGGCTCCGGATGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    451 CGTTTTCCGAATCTGACCGCTGCGCCGCATATTTCAACGGCTCCGGATGT    500

BSNT_05826___    501 GTGGCTGCTCGGCTCATCTGGAGAAAGCGCGCTGCTCGCAGCTGAATCTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    501 GTGGCTGCTCGGCTCATCTGGAGAAAGCGCGCTGCTCGCAGCTGAATCTG    550

BSNT_05826___    551 GCGCTGGCTATATGTTTGCCCATTTTATCAATGGAGAGGGCGGAGAGGGT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    551 GCGCTGGCTATATGTTTGCCCATTTTATCAATGGAGAGGGCGGAGAGGGT    600

BSNT_05826___    601 ACTGTCAGACAGTATAAGAGGAGATTCAAACCATCTGTGTTAGGAGATAC    650
                     |||||||||||||||||||||.||||||||||.|||||||||||||||||
BSU38100___yw    601 ACTGTCAGACAGTATAAGAGGCGATTCAAACCGTCTGTGTTAGGAGATAC    650

BSNT_05826___    651 GCCTCGAGCGGCAGTTGCTGTTTTTGTTCTTTGTGCTGACACGGAGGAGA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    651 GCCTCGAGCGGCAGTTGCTGTTTTTGTTCTTTGTGCTGACACGGAGGAGA    700

BSNT_05826___    701 AGGCAGAGGAGCTTGGGGCTGTGCTTGATTTTACACTTTTGGCGGGAGAG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    701 AGGCAGAGGAGCTTGGGGCTGTGCTTGATTTTACACTTTTGGCGGGAGAG    750

BSNT_05826___    751 CAGGGTATTCCTTTAGAGGGAGTCCCTTCGTATGAAGCTGTTCGGAAAAA    800
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38100___yw    751 CAGGGTATTCCTTTAGAGGGAGTTCCTTCGTATGAAGCTGTTCGGAAAAA    800

BSNT_05826___    801 TACGTATTCTCCTTATGAACAGAGACGAATTGCTGATAATCGAAATCGAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    801 TACGTATTCTCCTTATGAACAGAGACGAATTGCTGATAATCGAAATCGAA    850

BSNT_05826___    851 TGATTGTTGGTACGAAAGAACAGGTTAAGAAGCGGCTGTTAGCTTTGAGT    900
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38100___yw    851 TGATTGTTGGTACGAAAGAACAGGTTAAGGAGCGGCTGTTAGCTTTGAGT    900

BSNT_05826___    901 AAAGCGTATGAAACAGAGGAAATCATGGTGGTGACCATCACGCATCATTT    950
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU38100___yw    901 AACGCGTATGAAACAGAGGAAATCATGGTGGTGACCATCACGCATCATTT    950

BSNT_05826___    951 TGAAGATAAGCTCCGATCGTATCGATTATTGCAGGAGGCGTTTGCTGACT   1000
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38100___yw    951 TGAAGATAAGCTCCGATCGTATCGCTTATTGCAGGAGGCGTTTGCTGACT   1000

BSNT_05826___   1001 GA   1002
                     ||
BSU38100___yw   1001 GA   1002


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Natto Genome Project Bacillus subtilis subsp. natto str. BEST195

DNA alignment: BSNT_05826 and BSU38100

Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
