Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05852 and BSU38260

See Amino acid alignment / Visit BSNT_05852 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:07
# Commandline: needle
#    -asequence dna-align/BSNT_05852___ywbN.1.22522.seq
#    -bsequence dna-align/BSU38260___efeN.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05852___ywbN-BSU38260___efeN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05852___ywbN-BSU38260___efeN.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05852___ywbN
# 2: BSU38260___efeN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1251
# Identity:    1217/1251 (97.3%)
# Similarity:  1217/1251 (97.3%)
# Gaps:           0/1251 ( 0.0%)
# Score: 5949.0
# 
#
#=======================================

BSNT_05852___      1 ATGAGCGATGAACAAAAAAAGCCAGAACAAATTCATAGACGGGACATTTT     50
                     ||||||||||||||.||||||||||||||||||||.||||||||||||||
BSU38260___ef      1 ATGAGCGATGAACAGAAAAAGCCAGAACAAATTCACAGACGGGACATTTT     50

BSNT_05852___     51 AAAATGGGGGGCAATGGCGGGGGCAGCCGTTGCGATCGGTGCCAGCGGAC    100
                     |||||||||.||.|||||||||||||||||||||||||||||||||||.|
BSU38260___ef     51 AAAATGGGGAGCGATGGCGGGGGCAGCCGTTGCGATCGGTGCCAGCGGTC    100

BSNT_05852___    101 TCGGCGGTCTCGCTCCGCTTGTTCAGACTGCGGCTAAGCCATCGAAAAAG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef    101 TCGGCGGTCTCGCTCCGCTTGTTCAGACTGCGGCTAAGCCATCGAAAAAG    150

BSNT_05852___    151 GATGAAAAAGAGGAGGAGCAGATTGTTCCGTTTTACGGAAAGCATCAGGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef    151 GATGAAAAAGAGGAGGAGCAGATTGTTCCGTTTTACGGAAAGCATCAGGC    200

BSNT_05852___    201 CGGAATCACAACTGCCCATCAGACGTATGTCTATTTTGCTGCGCTGGATG    250
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38260___ef    201 CGGAATCACAACTGCCCATCAGACGTATGTCTATTTTGCTGCACTGGATG    250

BSNT_05852___    251 TAACAGCAAAAGACAAAAGCGACATCATTACGTTATTTAGAAACTGGACA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef    251 TAACAGCAAAAGACAAAAGCGACATCATTACGTTATTTAGAAACTGGACA    300

BSNT_05852___    301 AGTCTCACACAGATGCTGACATCTGGCAAGAAAATGTCATCGGAGCAGAG    350
                     ||||||||||||||||||||.||||||||||||||||||.||||||||||
BSU38260___ef    301 AGTCTCACACAGATGCTGACGTCTGGCAAGAAAATGTCAGCGGAGCAGAG    350

BSNT_05852___    351 AAATCAATATCTGCCCCCGCAGGATACAGGTGAGTCTGCTGATTTATCCC    400
                     ||||||.||||||||.||||||||||||||||||||||||||||||||||
BSU38260___ef    351 AAATCAGTATCTGCCGCCGCAGGATACAGGTGAGTCTGCTGATTTATCCC    400

BSNT_05852___    401 CTTCCAACTTAACGGTCACATTCGGATTTGGGCCTGGCTTTTTTGAAAAA    450
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38260___ef    401 CTTCCAACTTAACGGTCACATTCGGATTCGGGCCTGGCTTTTTTGAAAAA    450

BSNT_05852___    451 GACGGAAAGGACCGCTTCGGGCTGAAAAGCAAAAAACCGAAGCACCTAGC    500
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU38260___ef    451 GACGGAAAGGACCGCTTCGGACTGAAAAGCAAAAAACCGAAGCACCTAGC    500

BSNT_05852___    501 CGCTCTTCCAGCGATGCCTAATGACAACCTGGATGAAAAGCAGGGAGGCG    550
                     ||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38260___ef    501 CGCTCTTCCAGCGATGCCCAATGACAACCTGGATGAAAAGCAGGGAGGCG    550

BSNT_05852___    551 GGGACATCTGCATTCAAGTATGTGCAGACGATGAGCAAGTGGCGTTTCAC    600
                     |||||||||||||||||||.|||||||||||.||||||||||||||||||
BSU38260___ef    551 GGGACATCTGCATTCAAGTGTGTGCAGACGACGAGCAAGTGGCGTTTCAC    600

BSNT_05852___    601 GCGCTGCGTAACCTGCTAAATCAAGCGGTCGGCACTTGTGAGGTCCGTTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef    601 GCGCTGCGTAACCTGCTAAATCAAGCGGTCGGCACTTGTGAGGTCCGTTT    650

BSNT_05852___    651 TGTGAACAAAGGCTTTTTAAGCGGAGGAAAAAATGGCGAAACACCGCGCA    700
                     ||||||||||||||||||||||||.|||||||||||.|||||||||||||
BSU38260___ef    651 TGTGAACAAAGGCTTTTTAAGCGGTGGAAAAAATGGTGAAACACCGCGCA    700

BSNT_05852___    701 ACCTCTTCGGATTCAAAGATGGAACAGGCAACCAGAGCACGGAGGATGAC    750
                     ||||||||||.||.|||||||||||||||||||||||||||.||||||||
BSU38260___ef    701 ACCTCTTCGGGTTTAAAGATGGAACAGGCAACCAGAGCACGAAGGATGAC    750

BSNT_05852___    751 AGCTTGATGAACTCGATCGTGTGGGTTCAGTCCGGTGAGCCTGACTGGAT    800
                     |..|||||||||||||||||||||.|||||||.|||||||||||||||||
BSU38260___ef    751 ACGTTGATGAACTCGATCGTGTGGATTCAGTCTGGTGAGCCTGACTGGAT    800

BSNT_05852___    801 GACGGGCGGCACCTATATGGCTTTCCGGAAAATCAAAATGTTCCTTGAGA    850
                     ||||||||||||||||||||||||.||||||||||||||||||||||||.
BSU38260___ef    801 GACGGGCGGCACCTATATGGCTTTTCGGAAAATCAAAATGTTCCTTGAGG    850

BSNT_05852___    851 TATGGGACCGCTCTTCCCTCAAGGATCAAGAGGATACCTTCGGCCGCAGA    900
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU38260___ef    851 TATGGGACCGCTCTTCCCTCAAGGACCAAGAGGATACCTTCGGCCGCAGA    900

BSNT_05852___    901 AAAAGCTCAGGGGCGCCTTTCGGACAGAAAAAGGAAACAGATCCCGTGAA    950
                     ||||||||.|||||||||||.||.||||||||||||||||||||||||||
BSU38260___ef    901 AAAAGCTCGGGGGCGCCTTTTGGGCAGAAAAAGGAAACAGATCCCGTGAA    950

BSNT_05852___    951 GCTGAATCAAATTCCGTCTAATTCGCACGTCAGTCTAGCGAAATCTACGG   1000
                     ||||||||||||||||||||||||.|||||||||||||||||||||||.|
BSU38260___ef    951 GCTGAATCAAATTCCGTCTAATTCACACGTCAGTCTAGCGAAATCTACTG   1000

BSNT_05852___   1001 GAAAACAAATTTTGCGAAGAGCTTTCTCTTACACAGAAGGACTTGATCCG   1050
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef   1001 GGAAACAAATTTTGCGAAGAGCTTTCTCTTACACAGAAGGACTTGATCCG   1050

BSNT_05852___   1051 AAAACCGGCTATATGGATGCAGGTCTCCTGTTTATCAGTTTTCAAAAAAA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef   1051 AAAACCGGCTATATGGATGCAGGTCTCCTGTTTATCAGTTTTCAAAAAAA   1100

BSNT_05852___   1101 TCCCGACAATCAGTTTATCCCGATGCTGAAGGCTCTTTCAGCAAAGGATG   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef   1101 TCCCGACAATCAGTTTATCCCGATGCTGAAGGCTCTTTCAGCAAAGGATG   1150

BSNT_05852___   1151 CGTTAAACGAATATACACAAACAATCGGTTCTGCTTTATATGCATGCCCA   1200
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU38260___ef   1151 CGTTAAACGAATATACACAAACAATCGGTTCTGCTTTATACGCATGCCCA   1200

BSNT_05852___   1201 GGCGGCTGCAAAAAAGGAGAATATATTGCCCAGCGTTTGCTGGAATCATA   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38260___ef   1201 GGCGGCTGCAAAAAAGGAGAATATATTGCCCAGCGTTTGCTGGAATCATA   1250

BSNT_05852___   1251 A   1251
                     |
BSU38260___ef   1251 A   1251


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.