Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05875 and BSU38410

See Amino acid alignment / Visit BSNT_05875 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:10
# Commandline: needle
#    -asequence dna-align/BSNT_05875___sacX.1.22522.seq
#    -bsequence dna-align/BSU38410___sacX.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05875___sacX-BSU38410___sacX.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05875___sacX-BSU38410___sacX.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05875___sacX
# 2: BSU38410___sacX
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1380
# Identity:    1362/1380 (98.7%)
# Similarity:  1362/1380 (98.7%)
# Gaps:           0/1380 ( 0.0%)
# Score: 6738.0
# 
#
#=======================================

BSNT_05875___      1 TTGCAGAAAGAGATTGCAAAAGAATTATTGCTGCTCGCAGGAGGAAAAAA     50
                     |||||.|||||||||||||||||||||.||||||||||||||||||||||
BSU38410___sa      1 TTGCATAAAGAGATTGCAAAAGAATTACTGCTGCTCGCAGGAGGAAAAAA     50

BSNT_05875___     51 CAATATTATTAGCATCAGCCATTGTACGACCCGTCTTCGTTTTGATGTAA    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38410___sa     51 CAATATTATCAGCATCAGCCATTGTACGACCCGTCTTCGTTTTGATGTAA    100

BSNT_05875___    101 AGGACGAGACGAAAATTGATATACATGCCATTGAGAACCTGCAAGGTGTG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    101 AGGACGAGACGAAAATTGATATACATGCCATTGAGAACCTGCAAGGTGTG    150

BSNT_05875___    151 CAGGGCACCTTTTTCCGCTATGGGCTTTTCCAGATTATCTTCGGAACAGG    200
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38410___sa    151 CAGGGCACCTTTTTCCGCTATGGGCTTTTCCAGATTATCTTCGGAGCAGG    200

BSNT_05875___    201 CGTCGTCAACAAAATATATAAAGAAGTCGTTCATGAATGGGAGACCGCGC    250
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38410___sa    201 CGTCGTCAACAAAATATATAAAGAAGTCGTTCATGTATGGGAGACCGCGC    250

BSNT_05875___    251 CTTCTGAAGAGCCTGTCAACCAGAAAAAAGCCAGCCGGAAGCTGAACCCC    300
                     |||||||||||||||||.|||||||||||||||||||||||||||||||.
BSU38410___sa    251 CTTCTGAAGAGCCTGTCCACCAGAAAAAAGCCAGCCGGAAGCTGAACCCT    300

BSNT_05875___    301 GCCGCAGCTTTTGCGAAAACACTATCCGATATTTTTGTGCCGATTATTCC    350
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU38410___sa    301 GCCGCAGCTTTTGCGAAAACACTGTCCGATATTTTTGTGCCGATTATTCC    350

BSNT_05875___    351 GGCAATAACAGCAAGCGGCCTGCTCATGGGGCTGATCGGCATGATTAAAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU38410___sa    351 GGCAATAACAGCAAGCGGCCTGCTCATGGGGCTGATCGGCATGATTAAGG    400

BSNT_05875___    401 TGTTTCACTGGTTCGCTGCCGGCAGCCCATGGATTAAAATGCTCGACCTC    450
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    401 TGTTTCATTGGTTCGCTGCCGGCAGCCCATGGATTAAAATGCTCGACCTC    450

BSNT_05875___    451 GTGTCCAGCACAGCCTTTATTTTACTGCCGATTTTAGTTGGCTTCAGTGC    500
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38410___sa    451 GTGTCCAGCACAGCCTTTATTTTACTGCCGATTTTAGTCGGCTTCAGTGC    500

BSNT_05875___    501 CGCACGGCAATTTGGCAGCAACCCATACCTAGGGGCAGTGATTGCAGGGC    550
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    501 TGCACGGCAATTTGGCAGCAACCCATACCTAGGGGCAGTGATTGCAGGGC    550

BSNT_05875___    551 TTTTGACGCATCCTGATCTGCTGGACCCGTCTATGCTCGGCAGCAAAACC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    551 TTTTGACGCATCCTGATCTGCTGGACCCGTCTATGCTCGGCAGCAAAACC    600

BSNT_05875___    601 CCGTCTTCTTTAGACATATGGGGGCTTCATATCCCAATGATGGGCTATCA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    601 CCGTCTTCTTTAGACATATGGGGGCTTCATATCCCAATGATGGGCTATCA    650

BSNT_05875___    651 GGGTTCCATGATACCGATTCTTCTTTCCGTTTTTGTCATGAGCAAAATTG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    651 GGGTTCCATGATACCGATTCTTCTTTCCGTTTTTGTCATGAGCAAAATTG    700

BSNT_05875___    701 AGAAGCTATTAAAATCGATTGTGCCGAAGTCGCTTGATGTCGTGATCATT    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    701 AGAAGCTATTAAAATCGATTGTGCCGAAGTCGCTTGATGTCGTGATCATT    750

BSNT_05875___    751 CCCTTTATTACGGTCATGGTGACAGGATGCCTCGCGCTGATTGTGATGAA    800
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38410___sa    751 CCCTTTATTACGGTCATGGTGACAGGGTGCCTCGCGCTGATTGTGATGAA    800

BSNT_05875___    801 TCCCGCCGCGTCCATCATCGGCCAGATCATGACACAATCGATCGTCTATA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    801 TCCCGCCGCGTCCATCATCGGCCAGATCATGACACAATCGATCGTCTATA    850

BSNT_05875___    851 TTTATGATCACGCCGGCATTGCCGCCGGAGCTCTTTTCGGCGGCATCTAC    900
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU38410___sa    851 TTTATGATCACGCCGGCATTGCTGCCGGAGCTCTTTTCGGCGGCATCTAC    900

BSNT_05875___    901 TCCACCATCGTCCTATCTGGATTGCATCATAGCTTTTATGCAATTGAGGC    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    901 TCCACCATCGTCCTATCTGGATTGCATCATAGCTTTTATGCAATTGAGGC    950

BSNT_05875___    951 AACGCTGCTTGCTAATCCGCATGTCGGTGTCAACTTTTTAGTGCCGATAT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa    951 AACGCTGCTTGCTAATCCGCATGTCGGTGTCAACTTTTTAGTGCCGATAT   1000

BSNT_05875___   1001 GGTCGATGGCGAATGTGGCCCAAGGCGGAGCGGGGCTTGCGGTATTCCTC   1050
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa   1001 GGTCGATGGCGAATGTGGCCCAAGGCGGAGCGGGGCTTGCGGTATTCCTC   1050

BSNT_05875___   1051 AAAACGAAACAATCAAGCCTGAAGAAAATTGCGCTCCCCGCTTCTCTGAC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa   1051 AAAACGAAACAATCAAGCCTGAAGAAAATTGCGCTCCCCGCTTCTCTGAC   1100

BSNT_05875___   1101 CGCGTTTTTAGGCATTGTTGAGCCGATTGTATTCGGGGTAAATCTCAAAT   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa   1101 CGCGTTTTTAGGCATTGTTGAGCCGATTGTATTCGGGGTAAATCTCAAAT   1150

BSNT_05875___   1151 TGATCCGTCCCTTTATCGGAGCAGCCATCGGCGGTGCTATTGGCGGAGCA   1200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38410___sa   1151 TGATCCGTCCCTTTATCGGAGCAGCCATCGGCGGTGCTATTGGCGGAGCA   1200

BSNT_05875___   1201 TACGTGGTTGCGGTACAAGTTGTGGCAAATTCCTACGGGCTGACAGGCAT   1250
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38410___sa   1201 TACGTGGTTGCGGTACAAGTTGTGGCAAATTCCTACGGACTGACAGGCAT   1250

BSNT_05875___   1251 TCCGATGATTTCAATTGTGCTGCCGTTTGGCGCCGCGAATTTTGTTCATT   1300
                     |||||||||||||||.||||||||||||||||||||.|||||||||||||
BSU38410___sa   1251 TCCGATGATTTCAATCGTGCTGCCGTTTGGCGCCGCTAATTTTGTTCATT   1300

BSNT_05875___   1301 ATATGATCGGTTTTTTGATCGCAGCCGTCTCTGCTTTTATAGCTACATTG   1350
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU38410___sa   1301 ATATGATCGGTTTCTTGATCGCAGCCGTCTCTGCTTTTATAGCTACATTG   1350

BSNT_05875___   1351 TTTCTCGGGTTTAAAGAAGAGACAGAATAA   1380
                     ||||||||||||||||||||||||||||||
BSU38410___sa   1351 TTTCTCGGGTTTAAAGAAGAGACAGAATAA   1380


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