Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home About Browser Genes Download Publications

DNA alignment: BSNT_05887 and BSU38490

See Amino acid alignment / Visit BSNT_05887 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:11
# Commandline: needle
#    -asequence dna-align/BSNT_05887___menA.1.22522.seq
#    -bsequence dna-align/BSU38490___menA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05887___menA-BSU38490___menA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05887___menA-BSU38490___menA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05887___menA
# 2: BSU38490___menA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 936
# Identity:     868/936 (92.7%)
# Similarity:   868/936 (92.7%)
# Gaps:          51/936 ( 5.4%)
# Score: 4272.0
# 
#
#=======================================

BSNT_05887___      0 --------------------------------------------------      0
                                                                       
BSU38490___me      1 ATGAACCAAACAAATAAGGGTGAGGGTCAGACAGCGCCGCAAAAAGAAAG     50

BSNT_05887___      1 -ATGGGGCAGATCCTTTGGCAGTTAACCCGTCCTCATACGTTAACCGCAT     49
                      |||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me     51 CATGGGGCAGATCCTTTGGCAGTTAACCCGTCCTCATACGTTAACCGCAT    100

BSNT_05887___     50 CGTTTGTGCCTGTGCTGCTCGGAACCGTTTTGGCGATGTTTTATGTGAAG     99
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    101 CGTTTGTGCCTGTGCTGCTCGGAACCGTTTTGGCGATGTTTTATGTGAAG    150

BSNT_05887___    100 GTTGATCTGCTGCTGTTTTTGGCTATGCTGTTTTCTTGCCTATGGATCCA    149
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    151 GTTGATCTGCTGCTGTTTTTGGCTATGCTGTTTTCTTGCCTATGGATCCA    200

BSNT_05887___    150 GATCGCGACGAACTTATTTAATGAATATTATGATTTTAAACGCGGATTAG    199
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38490___me    201 GATCGCGACGAACTTATTTAATGAATACTATGATTTTAAACGCGGATTAG    250

BSNT_05887___    200 ATACAGCAGAATCAGTCGGAATCGGAGGGGCAATTGTACGCCACGGAATG    249
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38490___me    251 ATACAGCAGAATCAGTCGGAATCGGAGGGGCCATTGTACGCCACGGAATG    300

BSNT_05887___    250 AAGCCTAAAACGATTTTGCAATTAGCTCTGGCATCATACGGGATTGCCAT    299
                     |||||||||||||||||||||||||||||.||.|||||||||||||||||
BSU38490___me    301 AAGCCTAAAACGATTTTGCAATTAGCTCTTGCCTCATACGGGATTGCCAT    350

BSNT_05887___    300 TTTGCTCGGTGTCTATATTTGTGCGAGCAGCAGCTGGTGGCTTGCGCTGA    349
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU38490___me    351 TTTGCTCGGTGTCTATATTTGTGCCAGCAGCAGCTGGTGGCTTGCGCTGA    400

BSNT_05887___    350 TCGGCCTTGTCGGCATGGCGATCGGCTACCTGTATACAGGCGGGCCGCTG    399
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    401 TCGGCCTTGTCGGCATGGCGATCGGCTACCTGTATACAGGCGGGCCGCTG    450

BSNT_05887___    400 CCGATTGCGTACACGCCGTTCGGTGAATTATTCTCAGGCATTTGCATGGG    449
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    451 CCGATTGCGTACACGCCGTTCGGTGAATTATTCTCAGGCATTTGCATGGG    500

BSNT_05887___    450 TTCGGTGTTTGTGCTGATTTCGTTTTTCATTCAGACAGATATGATCAACA    499
                     |||||||||||||||||||||||||||||||||||||||||.||||||.|
BSU38490___me    501 TTCGGTGTTTGTGCTGATTTCGTTTTTCATTCAGACAGATAAGATCAATA    550

BSNT_05887___    500 CGCAAAGCATTTTGATTTCCATCCCGATTGCGATTCTTGTCGGCGCGATT    549
                     .|||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    551 TGCAGAGCATTTTGATTTCCATCCCGATTGCGATTCTTGTCGGCGCGATT    600

BSNT_05887___    550 AATTTGTCAAACAACATTCGCGATATTGAAGAGGACAAAAAAGGCGGCCG    599
                     ||..||||.|||||||||||.||||||||||||||||||||||||||.||
BSU38490___me    601 AACCTGTCGAACAACATTCGTGATATTGAAGAGGACAAAAAAGGCGGACG    650

BSNT_05887___    600 CAAAACATTGGCGATTTTGATGGGGCATAAGGGAGCTGTTACTCTGTTAG    649
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    651 CAAAACATTGGCGATTTTGATGGGGCATAAGGGAGCTGTTACTCTGTTAG    700

BSNT_05887___    650 CTGCGTCGTTTGCCGTCGCTTATATCTGGGTTGTCGGCTTGGTTATTACC    699
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    701 CTGCGTCGTTTGCCGTCGCTTATATCTGGGTTGTCGGCTTGGTTATTACC    750

BSNT_05887___    700 GGTGCCGCAAGCCCATGGCTGTTTGTCGTCTTTTTGAGCGTGCCTAAGCC    749
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    751 GGTGCCGCAAGCCCATGGCTGTTTGTCGTCTTTTTGAGCGTGCCTAAGCC    800

BSNT_05887___    750 GGTTCAGGCAGTGAAGGGCTTCGTCCAAAAAGAAATGCCGATGAATATGA    799
                     |||||||||||||||||||||||||||.||.|||||||||||||||||||
BSU38490___me    801 GGTTCAGGCAGTGAAGGGCTTCGTCCAGAACGAAATGCCGATGAATATGA    850

BSNT_05887___    800 TTGTCGCAATGAAATCAACAGCCCAAACAAATACATTTTTCGGATTCCTG    849
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38490___me    851 TTGTCGCAATGAAATCAACAGCCCAAACAAATACATTTTTCGGATTCCTG    900

BSNT_05887___    850 CTTTCGATCGGATTATTGATCAGCTATTTCCGATAA    885
                     ||.|||||||||||||||||||||||||||||||||
BSU38490___me    901 CTCTCGATCGGATTATTGATCAGCTATTTCCGATAA    936


#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.