Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05895 and BSU38530

See Amino acid alignment / Visit BSNT_05895 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:12
# Commandline: needle
#    -asequence dna-align/BSNT_05895___dltD.1.22522.seq
#    -bsequence dna-align/BSU38530___dltD.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05895___dltD-BSU38530___dltD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05895___dltD-BSU38530___dltD.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05895___dltD
# 2: BSU38530___dltD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1179
# Identity:    1176/1179 (99.7%)
# Similarity:  1176/1179 (99.7%)
# Gaps:           0/1179 ( 0.0%)
# Score: 5868.0
# 
#
#=======================================

BSNT_05895___      1 ATGAAAAAGCGTTTTTTCGGTCCAATTATTTTGGCGTTTATTCTATTCGC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl      1 ATGAAAAAGCGTTTTTTCGGTCCAATTATTTTGGCGTTTATTCTATTCGC     50

BSNT_05895___     51 AGGCGCCATCGCAATTCCATCTTCATGGCTGACAGGCTTCATCACCGATA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl     51 AGGCGCCATCGCAATTCCATCTTCATGGCTGACAGGCTTCATCACCGATA    100

BSNT_05895___    101 AGCGTGTGAAAGAGTCAGCAACAGCCTTGAATCCGAGTATGTTTCAAGGG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    101 AGCGTGTGAAAGAGTCAGCAACAGCCTTGAATCCGAGTATGTTTCAAGGG    150

BSNT_05895___    151 CTATATTTACAAGATCAGATGCTCAAAGATCCGACATATCTTCCGATTTA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    151 CTATATTTACAAGATCAGATGCTCAAAGATCCGACATATCTTCCGATTTA    200

BSNT_05895___    201 CGGGTCTTCTGAGCTTTCTCGGCTGGACGAGTTCCACCCATCTAATTATT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    201 CGGGTCTTCTGAGCTTTCTCGGCTGGACGAGTTCCACCCATCTAATTATT    250

BSNT_05895___    251 TTCAGGTAAACAATGAGGGATTCACGCCATACCTTGTCGGCAAAGGCGGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    251 TTCAGGTAAACAATGAGGGATTCACGCCATACCTTGTCGGCAAAGGCGGA    300

BSNT_05895___    301 TCCCAGTCATTGATTCATTCTTTAAACTTCGCTGCCCACATGGATCAGCT    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    301 TCCCAGTCATTGATTCATTCTTTAAACTTCGCTGCCCACATGGATCAGCT    350

BSNT_05895___    351 GAAGGGCAAAAAAATCGTATTCATCGTGTCTCCGCAATGGTTTATTAAGC    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    351 GAAGGGCAAAAAAATCGTATTCATCGTGTCTCCGCAATGGTTTATTAAGC    400

BSNT_05895___    401 GCGGGTCTGATGAACAGCATTTCGCGCCGAACTATTCTGCGCTGCAAGGG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    401 GCGGGTCTGATGAACAGCATTTCGCGCCGAACTATTCTGCGCTGCAAGGG    450

BSNT_05895___    451 CTTGATTTGGCATTTAACGATCAGATCGACCCTGAAATTAAAAAGAAAAT    500
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38530___dl    451 CTTGATTTGGCATTTAACGATCAGATCGATCCTGAAATTAAAAAGAAAAT    500

BSNT_05895___    501 GATGAAACGCATGCTTCGCTTTAAGGCTGTGCAAAACGATGCCATTCTTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    501 GATGAAACGCATGCTTCGCTTTAAGGCTGTGCAAAACGATGCCATTCTTT    550

BSNT_05895___    551 CTGAGCTGTACAAAGCAATGGTAAACGGCCAGACGTGGAAAGTGAACGCG    600
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU38530___dl    551 CTGAGCTGTACAAAGCAATGGTAAACGGTCAGACGTGGAAAGTGAACGCG    600

BSNT_05895___    601 CTGAAGCCGGCGGCGAAAGTGTATTACAGCATGCTGGAAAAGAAAGATCT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    601 CTGAAGCCGGCGGCGAAAGTGTATTACAGCATGCTGGAAAAGAAAGATCT    650

BSNT_05895___    651 GTATTATTCAACGACAGAATCATCCGGGCCAAAGCGCTATATCTCGCAGT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    651 GTATTATTCAACGACAGAATCATCCGGGCCAAAGCGCTATATCTCGCAGT    700

BSNT_05895___    701 CAGTAAAGGATAAGTCATGGTCTGAATTGAATAAACTAGCGGATCAATCG    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    701 CAGTAAAGGATAAGTCATGGTCTGAATTGAATAAACTAGCGGATCAATCG    750

BSNT_05895___    751 GGCAAACGCCACTCCGGTTCTAACGATTTTCACATCGACAACCCTGTCTA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    751 GGCAAACGCCACTCCGGTTCTAACGATTTTCACATCGACAACCCTGTCTA    800

BSNT_05895___    801 TAAAAAGCTGAAGCCGAAAGTGCCTAAGCTGAAAGGGAAAAACAAAGGAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    801 TAAAAAGCTGAAGCCGAAAGTGCCTAAGCTGAAAGGGAAAAACAAAGGAA    850

BSNT_05895___    851 GATCGTATGCGGTGTCACCGGAATATGGCGACTTTGAAATGATGCTCGAT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    851 GATCGTATGCGGTGTCACCGGAATATGGCGACTTTGAAATGATGCTCGAT    900

BSNT_05895___    901 ATCCTGAAGGATGCGGGCGCAGAGCCTATGTTTGTCACCATTCCTGTTAA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    901 ATCCTGAAGGATGCGGGCGCAGAGCCTATGTTTGTCACCATTCCTGTTAA    950

BSNT_05895___    951 CGGGAAATGGTACGATTACACGGGCTTCCCGAAAAAAGGACGCACTGACT   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl    951 CGGGAAATGGTACGATTACACGGGCTTCCCGAAAAAAGGACGCACTGACT   1000

BSNT_05895___   1001 ATTACAAAAAGGTAAATAAACAAATCAGAGCGAAGGGTTTCCAGGTTGCT   1050
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU38530___dl   1001 ATTACAAAAAGGTAAATAAACAAATCAGAGCGAAGGGCTTCCAGGTTGCT   1050

BSNT_05895___   1051 GATTTCTCAGGGCATGAATATGACCCGTATTTCATGAAAGACACCATTCA   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl   1051 GATTTCTCAGGGCATGAATATGACCCGTATTTCATGAAAGACACCATTCA   1100

BSNT_05895___   1101 CATCGGCTGGAAAGGCTGGGTGTATGTCGATAAAGCAATTGACGAATTTT   1150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38530___dl   1101 CATCGGCTGGAAAGGCTGGGTGTATGTCGATAAAGCAATTGACGAATTTT   1150

BSNT_05895___   1151 ATAAAACCGGAAAAGTCACTTCATCCTGA   1179
                     |||||||||||||||||||||||||||||
BSU38530___dl   1151 ATAAAACCGGAAAAGTCACTTCATCCTGA   1179


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