Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05900 and BSU38560
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:13
# Commandline: needle
# -asequence dna-align/BSNT_05900___licH.1.22522.seq
# -bsequence dna-align/BSU38560___licH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05900___licH-BSU38560___licH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05900___licH-BSU38560___licH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05900___licH
# 2: BSU38560___licH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1329
# Identity: 1304/1329 (98.1%)
# Similarity: 1304/1329 (98.1%)
# Gaps: 0/1329 ( 0.0%)
# Score: 6420.0
#
#
#=======================================
BSNT_05900___ 1 ATGACAAAAGGATTGAAGATTGTAACGATTGGCGGAGGTTCAAGCTATAC 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 1 ATGACAAAAGGATTGAAGATTGTAACGATTGGCGGAGGTTCAAGCTATAC 50
BSNT_05900___ 51 GCCCGAGCTAGTGGAGGGGTTCATTAAACGGTATGATGAGCTGCCTGTCC 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 51 GCCCGAGCTAGTGGAGGGGTTCATTAAACGGTATGATGAGCTGCCTGTCC 100
BSNT_05900___ 101 GTGAATTATGGCTTGTCGATATCCCCGAGGGCGAAGAAAAGCTGAATATT 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 101 GTGAATTATGGCTTGTCGATATCCCCGAGGGCGAAGAAAAGCTGAATATT 150
BSNT_05900___ 151 GTCGGCACACTCGCCAAAAGGATGGTTGAAAAAGCTGGCGTCCCGATTGA 200
||||||||||||||||||.|||||||||||||||||||||||||||||||
BSU38560___li 151 GTCGGCACACTCGCCAAACGGATGGTTGAAAAAGCTGGCGTCCCGATTGA 200
BSNT_05900___ 201 CATTCATCTTACGCTCGACCGGAGAAAAGCGCTGAAAGACGCAGACTTTG 250
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38560___li 201 CATTCATCTTACGCTCGACCGGAGAAAGGCGCTGAAAGACGCAGACTTTG 250
BSNT_05900___ 251 TTACGACCCAATTCCGTGTCGGACTTTTGCAGGCAAGAGCAAAGGATGAG 300
|.||||||||||||||.|||||||||||||||||||||||||||||||||
BSU38560___li 251 TCACGACCCAATTCCGCGTCGGACTTTTGCAGGCAAGAGCAAAGGATGAG 300
BSNT_05900___ 301 CGCATTCCGCTAAAATATGGTGTAATTGGCCAGGAAACAAACGGCCCGGG 350
|||||||||||||||||.||.||.||.|||||||||||||||||||||||
BSU38560___li 301 CGCATTCCGCTAAAATACGGAGTGATAGGCCAGGAAACAAACGGCCCGGG 350
BSNT_05900___ 351 AGGCCTGTTTAAAGGATTGCGCACAATTCCGGTCATCCTTGAGATCGCAA 400
|||.||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 351 AGGTCTGTTTAAAGGATTGCGCACAATTCCGGTCATCCTTGAGATCGCAA 400
BSNT_05900___ 401 AGGACATAGAAGAGCTTTGCCCGAACGCTTGGCTTGTTAACTTCACAAAC 450
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 401 AGGACATAGAAGAGCTTTGCCCGAACGCTTGGCTTGTTAACTTCACAAAC 450
BSNT_05900___ 451 CCTGCCGGCATGGTAACAGAAGCCTTGCTTCGCTACGCCAACCTGAAGAA 500
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU38560___li 451 CCTGCCGGCATGGTAACAGAAGCCTTGCTTCGCTACTCCAACCTGAAGAA 500
BSNT_05900___ 501 AGTCGTCGGTCTCTGTAATGTTCCAATCGGCATCAAAATGGGCGTAGCCA 550
||||||||||||.||.||||||||||||||||||||||||||||||||||
BSU38560___li 501 AGTCGTCGGTCTTTGCAATGTTCCAATCGGCATCAAAATGGGCGTAGCCA 550
BSNT_05900___ 551 AAGCGCTTGATGTAGATGTGGACCGCGTAGAAGTCCAATTCGCCGGACTG 600
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU38560___li 551 AAGCGCTTGATGTAGATGTGGACCGCGTAGAAGTCCAATTTGCCGGACTG 600
BSNT_05900___ 601 AACCATATGGTATTTGGGCTGGATGTTTTCTTGGACGGCGTAAGTGTGAA 650
||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU38560___li 601 AACCATATGGTATTCGGGCTGGATGTTTTCTTGGACGGCGTAAGTGTGAA 650
BSNT_05900___ 651 GGAGCAAGTCATCGAGGCGATGGGCGACCCGAAAAACGCGATGACGATGA 700
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 651 GGAGCAAGTCATCGAGGCGATGGGCGACCCGAAAAACGCGATGACGATGA 700
BSNT_05900___ 701 AAAATATCTCAGGCGCCGAATGGGAACCGGATTTCTTAAAAGCGCTCAAT 750
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 701 AAAATATCTCAGGCGCCGAATGGGAACCGGATTTCTTAAAAGCGCTCAAT 750
BSNT_05900___ 751 GTCATCCCTTGCGGCTATCACCGTTACTATTTCAAAACAAAAGAGATGCT 800
||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU38560___li 751 GTCATCCCTTGCGGCTATCACCGTTACTATTTTAAAACAAAAGAGATGCT 800
BSNT_05900___ 801 GGAGCACGAACTGGAAGCATCACAAACGGAGGGCACCCGCGCAGAAGTCG 850
||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38560___li 801 GGAGCACGAACTGGAAGCATCACAAACGGAGGGCACCCGCGCTGAAGTCG 850
BSNT_05900___ 851 TACAGAAGGTCGAAAAAGAGCTGTTCGAGCTTTATAAAGATCCGAACCTT 900
|||||||||||||||||||||||||||||||||||||||||||.||||||
BSU38560___li 851 TACAGAAGGTCGAAAAAGAGCTGTTCGAGCTTTATAAAGATCCAAACCTT 900
BSNT_05900___ 901 GCGATCAAACCGCCGCAGCTGGAAAAACGGGGCGGAGCTTACTACAGTGA 950
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 901 GCGATCAAACCGCCGCAGCTGGAAAAACGGGGCGGAGCTTACTACAGTGA 950
BSNT_05900___ 951 TGCAGCATGTAACTTAATCAGCTCCATTTATAATGATAAACATGACATTC 1000
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 951 TGCAGCATGTAACTTAATCAGCTCCATTTATAATGATAAACATGACATTC 1000
BSNT_05900___ 1001 AGCCGGTGAACACAATCAATAATGGTGCAATAGCGAGCATTCCAGACGAT 1050
|||||||||||||.|||||||||||||||||||||||.||||||||||||
BSU38560___li 1001 AGCCGGTGAACACGATCAATAATGGTGCAATAGCGAGTATTCCAGACGAT 1050
BSNT_05900___ 1051 TCCGCAGTTGAAGTGAACTGTGTGATGACGAAAACTGGCCCTAAGCCAAT 1100
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38560___li 1051 TCCGCAGTTGAAGTGAACTGTGTGATGACGAAAACCGGCCCTAAGCCAAT 1100
BSNT_05900___ 1101 TGCTGTCGGCGACTTGCCGGTGTCTGTCCGTGGCCTCGTCCAGCAAATCA 1150
||||||||||||||||||||||||||||||.|||||.|||||||||||||
BSU38560___li 1101 TGCTGTCGGCGACTTGCCGGTGTCTGTCCGCGGCCTTGTCCAGCAAATCA 1150
BSNT_05900___ 1151 AATCCTTTGAACGTGTCGCGGCAGAAGCGGCAGTTACAGGTGACTACCAA 1200
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38560___li 1151 AATCCTTTGAACGTGTCGCGGCAGAAGCGGCAGTTACAGGTGACTATCAA 1200
BSNT_05900___ 1201 ACTGCACTCCTTGCCATGACGATTAACCCGCTTGTCCCGTCCGATACTGT 1250
|||||.||||||||||||||||||||||||||||||||||||||||||||
BSU38560___li 1201 ACTGCGCTCCTTGCCATGACGATTAACCCGCTTGTCCCGTCCGATACTGT 1250
BSNT_05900___ 1251 GGCCAAACAGATTTTAGACGAAATGCTGGAGGCGCACAAAGCGTATCTGC 1300
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38560___li 1251 GGCCAAACAGATTTTAGACGAAATGCTAGAGGCGCACAAAGCGTATCTGC 1300
BSNT_05900___ 1301 CGCAGTTTTTCAACAAAATTGAAGCGTAA 1329
|||||||||||||||||||||||||||||
BSU38560___li 1301 CGCAGTTTTTCAACAAAATTGAAGCGTAA 1329
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