Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05901 and BSU38570

See Amino acid alignment / Visit BSNT_05901 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:13
# Commandline: needle
#    -asequence dna-align/BSNT_05901___licA.1.22522.seq
#    -bsequence dna-align/BSU38570___licA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05901___licA-BSU38570___licA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05901___licA-BSU38570___licA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05901___licA
# 2: BSU38570___licA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 333
# Identity:     331/333 (99.4%)
# Similarity:   331/333 (99.4%)
# Gaps:           0/333 ( 0.0%)
# Score: 1647.0
# 
#
#=======================================

BSNT_05901___      1 GTGAATGAGGAAATGGAACAAATCATTTTTCAAATCATCCTTCACGGAGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li      1 GTGAATGAGGAAATGGAACAAATCATTTTTCAAATCATCCTTCACGGAGG     50

BSNT_05901___     51 AAACGGTAGAAGCTCCGCAATGGAGGCCATTGCCGCTGCGAAAAGCGGCG    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||.|
BSU38570___li     51 AAACGGTAGGAGCTCCGCAATGGAGGCCATTGCCGCTGCGAAAAGCGGTG    100

BSNT_05901___    101 ACGCAGAAGAAGCGCGGAAAAAGCTTCAAGACGCTGCTGAAGAATTGTCA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li    101 ACGCAGAAGAAGCGCGGAAAAAGCTTCAAGACGCTGCTGAAGAATTGTCA    150

BSNT_05901___    151 AAAGCCCATCATTATCAGACAGAGCTGATCCAAAATGAAGCGGGCGGAGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li    151 AAAGCCCATCATTATCAGACAGAGCTGATCCAAAATGAAGCGGGCGGAGA    200

BSNT_05901___    201 AAAGACGGAAATGACGCTTCTGATGGTTCATGCACAGGATCATTTAATGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li    201 AAAGACGGAAATGACGCTTCTGATGGTTCATGCACAGGATCATTTAATGA    250

BSNT_05901___    251 ATGCAATGACAGTGAAGGATATGGCTGCAGAGATCATTGAGTTATATGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38570___li    251 ATGCAATGACAGTGAAGGATATGGCTGCAGAGATCATTGAGTTATATGAA    300

BSNT_05901___    301 AAAATCACCGAGCAAAGGGGAGCAAGCATATGA    333
                     |||||||||||||||||||||||||||||||||
BSU38570___li    301 AAAATCACCGAGCAAAGGGGAGCAAGCATATGA    333


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