Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05906 and BSU38600

See Amino acid alignment / Visit BSNT_05906 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:14
# Commandline: needle
#    -asequence dna-align/BSNT_05906___licR.1.22522.seq
#    -bsequence dna-align/BSU38600___licR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05906___licR-BSU38600___licR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05906___licR-BSU38600___licR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05906___licR
# 2: BSU38600___licR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1927
# Identity:    1865/1927 (96.8%)
# Similarity:  1865/1927 (96.8%)
# Gaps:          41/1927 ( 2.1%)
# Score: 9221.0
# 
#
#=======================================

BSNT_05906___      1 ---------------------------------------ATGGCGGCTGA     11
                                                            |||||||||||
BSU38600___li      1 ATGCTTCATGGGCGACTACGTGATATTCTGCGCTTGCTGATGGCGGCTGA     50

BSNT_05906___     12 AGCCCCGGTGACAAGTTCGTTTTTTGCGGCGCAATTAAACGTAACGATGC     61
                     |||||||||||||||||||||||||||.|||||||||||||||||||.||
BSU38600___li     51 AGCCCCGGTGACAAGTTCGTTTTTTGCCGCGCAATTAAACGTAACGACGC    100

BSNT_05906___     62 GGACAGCCCGCAATGATATAAAGGAACTTCAAGGTGTGCTAAGCGGCCAC    111
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    101 GGACAGTCCGCAATGATATAAAGGAACTTCAAGGTGTGCTAAGCGGCCAC    150

BSNT_05906___    112 GGTGCCTTTGTACAATCGGTAAGAGGCTCCGGCTACAAGCTCCGCATTGA    161
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU38600___li    151 GGTGCCTTTGTACAATCTGTAAGAGGCTCCGGCTACAAGCTCCGCATTGA    200

BSNT_05906___    162 TGACGAGCAAGTATTCAGAACACTGCTGCAAGATGTATTTCAGCAAAAAA    211
                     |||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38600___li    201 TGACGAGCAAGTATTCAGAACACTGCTGCAAGATGAATTTCAGCAAAAAA    250

BSNT_05906___    212 AGGGCCTGCCGGTATTGCCGGAGGAGAGAATGGCCTATCTTATGAAACGT    261
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    251 AGGGCCTGCCGGTATTGCCGGAGGAGAGAATGGCCTATCTTATGAAACGT    300

BSNT_05906___    262 CTGCTGCTGGCGGACCATTATCTCAAGCTCGATGAACTTGCTGAAGAACT    311
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    301 CTGCTGCTGGCGGACCATTATCTCAAGCTCGATGAACTTGCTGAAGAACT    350

BSNT_05906___    312 ATTTATCTCAAAATCTACACTCCAAACGGATTTAAAGGAAGTAAAGAAAC    361
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    351 ATTTATCTCAAAATCTACACTCCAAACGGATTTAAAGGAAGTAAAGAAAC    400

BSNT_05906___    362 GTCTGCTGCCTTACCGCATCGTCATGGAAACACGTCCGAATTACGGCTTC    411
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    401 GTCTGCTGCCTTACCGCATCGTCATGGAAACACGTCCGAATTACGGCTTC    450

BSNT_05906___    412 AAGCTGCGCGGGGACGAGGTGCAGATGAGGTACTGCATGGCGGAGTACAT    461
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    451 AAGCTGCGCGGGGACGAGGTGCAGATGAGGTACTGCATGGCGGAGTACAT    500

BSNT_05906___    462 TGTTGATGAAAGAGAAACGGAGATAGATGTTTTAAATGAAAAGGCTGATA    511
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    501 TGTTGATGAAAGAGAAACGGAGATAGATGTTTTAAATGAAAAGGCTGATA    550

BSNT_05906___    512 TTTTGCCAAAAGAAGAAATTGAGATCATCCGTTCCGCCATCTTGAAAAAA    561
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    551 TTTTGCCAAAAGAAGAAATTGAGATCATCCGTTCCGCCATCTTGAAAAAA    600

BSNT_05906___    562 ATGAAAAACGACCGCATCCCTCTGTCCAACATGGGACTGAATAACCTCAT    611
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    601 ATGAAAAACGACCGCATCCCTCTGTCCAACATGGGACTGAATAACCTCAT    650

BSNT_05906___    612 TATCCATATTGCTATCGCCTGTAAACGGATTAGAACGGAAAACTATGTAT    661
                     |||||||||.||||||||||||||||||||.|||||||||||||||||.|
BSU38600___li    651 TATCCATATCGCTATCGCCTGTAAACGGATCAGAACGGAAAACTATGTTT    700

BSNT_05906___    662 CTCTTTTCCCGAAAGATATGGATCATATCCTGCATCAAAAGGAGTACCAG    711
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    701 CTCTTTTCCCGAAAGATATGGATCATATCCTGCATCAAAAGGAGTACCAG    750

BSNT_05906___    712 GCTGCAGAAGCCATCGTAAAAGAGCTGGAATCAAAGCTTTCCGTTACATT    761
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU38600___li    751 GCTGCAGAAGCCATCGTAAAAGAGCTGGAATCAAAGCTTTCCGTTACGTT    800

BSNT_05906___    762 TCCGAAAGAAGAGACGGCCTACATCACCATGCATCTCCTTGGCACAAAAC    811
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU38600___li    801 TCCGAAAGACGAGACGGCCTACATCACCATGCATCTCCTTGGCACAAAAC    850

BSNT_05906___    812 GAATGACACAATCACAATGCGGAGAGGACACATTTTCAATAGAAGAGGAA    861
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    851 GAATGACACAATCACAATGCGGAGAGGACACATTTTCAATAGAAGAGGAA    900

BSNT_05906___    862 ACCGATCAGCTGACACTTGCCATGATCAAAGCTGTTGATCGTGAACTGAA    911
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li    901 ACCGATCAGCTGACACTTGCCATGATCAAAGCTGTTGATCGTGAACTGAA    950

BSNT_05906___    912 GCTTGGCATCCTGCATGACAAAGAGCTGAAAATCGGCTTGGCCCTGCATA    961
                     ||||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38600___li    951 GCTTGGCATCCTGCATGACAAAGAGCTGAAAATCGGCTTGGCACTGCATA   1000

BSNT_05906___    962 TGAAGCCGGCGATCAGCCGCAACCGATACGGCATGAATCTTCGAAATCCG   1011
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1001 TGAAGCCGGCGATCAGCCGCAACCGATACGGCATGAATCTTCGAAATCCG   1050

BSNT_05906___   1012 ATGCTGGCAGCGATCAAGGAACATTATCCACTCGCTTTTGAAGCCGGGAT   1061
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1051 ATGCTGGCAGCGATCAAGGAACATTATCCACTCGCTTTTGAAGCCGGGAT   1100

BSNT_05906___   1062 CATTGCCGGAATCGTGATAAAGGAACAAACGGGTATTGAGATTCATGAAA   1111
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1101 CATTGCCGGAATCGTGATAAAGGAACAAACGGGTATTGAGATTCATGAAA   1150

BSNT_05906___   1112 ACGAAATTGGATATTTGGCTCTCCACTTTGGCGCCGCGATTGAACGAAAA   1161
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1151 ACGAAATTGGATATTTGGCTCTCCACTTTGGCGCCGCGATTGAACGAAAA   1200

BSNT_05906___   1162 AAAACAGAAAGCCCGCCGAAACGCTGTATCATTGTATGCGCATCGGGAGC   1211
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1201 AAAACAGAAAGCCCGCCGAAACGCTGTATCATTGTATGCGCATCGGGAGC   1250

BSNT_05906___   1212 CGGAAGCGCCCAGCTTCTGCGCGAAAAACTGCGTTCCCATTTCGGCAAGC   1261
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1251 CGGAAGCGCCCAGCTTCTGCGCGAAAAACTGCGTTCCCATTTCGGCAAGC   1300

BSNT_05906___   1262 GGCTCGATATTCTTGGAACGGCTGAGTATTATAGTCTTGATCAAATGTCC   1311
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1301 GGCTCGATATTCTTGGAACGGCTGAGTATTATAGTCTTGATCAAATGTCC   1350

BSNT_05906___   1312 TACGAATCAATTGATTTTGTCATCAGTACCATTCCGATTAAAAAAGAGCT   1361
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU38600___li   1351 TACGAATCAATTGATTTTGTCATCAGCACCATTCCGATTAAAAAAGAGCT   1400

BSNT_05906___   1362 CCCTGTACCAGTACTGAAGGTTAACACCATCTTAGGCGGAACTGACTTTA   1411
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1401 CCCTGTACCAGTACTGAAGGTTAACACCATCTTAGGCGGAACTGACTTTA   1450

BSNT_05906___   1412 CAAAAATAGAATCTATTCTGAGTGATGAAAAGGAAAAAGCCAATCGCTAC   1461
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1451 CAAAAATAGAATCTATTCTGAGTGATGAAAAGGAAAAAGCCAATCGCTAC   1500

BSNT_05906___   1462 CTAAAAAAAGAACTCGTTTTTTTTCAGGAGGATCTGCGCTCAAAAGAAGA   1511
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1501 CTAAAAAAAGAACTCGTTTTTTTTCAGGAGGATCTGCGCTCAAAAGAAGA   1550

BSNT_05906___   1512 AGTGATTCAATTTTTAGGGCAGAAAGCGGTCGAATGCGGCTTTGCCAGA-   1560
                     ||||||||||||||||||||||||||.||||||||||||||||||| || 
BSU38600___li   1551 AGTGATTCAATTTTTAGGGCAGAAAGTGGTCGAATGCGGCTTTGCC-GAT   1599

BSNT_05906___   1561 GAAGAAATCATAGATTCCATTTTTGAAAGAGAAGACATGTCGCCAACGTG   1610
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1600 GAAGAAATCATAGATTCCATTTTTGAAAGAGAAGACATGTCGCCAACGTG   1649

BSNT_05906___   1611 TTTTGGCAATCTTGTTGCCATCCCGCACCCGCTTGTTCCGCAGACGAAAA   1660
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1650 TTTTGGCAATCTTGTTGCCATCCCGCACCCGCTTGTTCCGCAGACGAAAA   1699

BSNT_05906___   1661 CAACGTTTTGGGCTGTTTGTACGCTCAAAAAACCGATCGATTGGGAGAGT   1710
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU38600___li   1700 CAACGTTTTGGGCCGTTTGTACGCTCAAAAAACCGATCGATTGGGAGAGT   1749

BSNT_05906___   1711 CAGCGAGTTCAATTTGTCTGTTTGCTTTGTGTCGAAAAGGAGAACAAAGC   1760
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU38600___li   1750 CAGCGAGTTCAATTTGTCTGTCTGCTTTGTGTCGAAAAGGAGAACAAAGC   1799

BSNT_05906___   1761 TGACTTGCAAAGCATGTATAAACTGCTTGGCAGCATTTTGGATGACCCGG   1810
                     .||.||.|||||||||||||||||||||||||||||||||||||||||||
BSU38600___li   1800 GGATTTACAAAGCATGTATAAACTGCTTGGCAGCATTTTGGATGACCCGG   1849

BSNT_05906___   1811 CGGCGGTGAACCAGCTGGTCAAATGCCGTTCGTATCAAGAGCTTTCGGAT   1860
                     |||||.|||||||||||.|||||||||||||.||||||||||||||||||
BSU38600___li   1850 CGGCGATGAACCAGCTGATCAAATGCCGTTCATATCAAGAGCTTTCGGAT   1899

BSNT_05906___   1861 GTGTTTGACCAAAAAATGCTGAGCTGA   1887
                     |||||||||||||||||||||||||||
BSU38600___li   1900 GTGTTTGACCAAAAAATGCTGAGCTGA   1926


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