Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05935 and BSU38770
See
Amino acid alignment /
Visit
BSNT_05935 in genome browser /
Return to
Orthologue table
########################################
# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_05935.1.22522.seq
# -bsequence dna-align/BSU38770___cimH.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05935-BSU38770___cimH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05935-BSU38770___cimH.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05935
# 2: BSU38770___cimH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1353
# Identity: 659/1353 (48.7%)
# Similarity: 659/1353 (48.7%)
# Gaps: 675/1353 (49.9%)
# Score: 3219.0
#
#
#=======================================
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 1 ATGGGAGAGCTTCAAACACACATGCAATTGCAAACGGATACAATTCACGA 50
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 51 AGGGGTTCGAAAAGAGAATTGGTTTGCGAAAGCCATGAATATAAAAGTAG 100
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 101 GCATCATACCGCTTCCTGTGTATGCCTTGCTGTTTATATTAATCACTGTT 150
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 151 TTTGTTATGCATCACGATGTAAAAAGTGACATTTTGACATCCATTGCCGT 200
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 201 CATGGCGTTTTTCGGGTTTACCTTTGCCCAAATCGGCAAATCGATACCGA 250
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 251 TTGTTCGTTCTATCGGCGGCCCGGCCATCCTAGCTACTTTTATTCCGTCC 300
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 301 GCTGTCGTGTACTATCACCTGCTGCCTAATGATATCGTCAAATCCACCAC 350
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 351 AGAATTTACAGAAAACTCAAACTTTCTATATTTGTTTATCGCCGGTATTG 400
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 401 TCGTCGGAAGCATTCTCGGCATGAAAAGAGAAACACTCGTAAAAGCATTC 450
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 451 ATGAAAATCTTTATTCCGCTTATTGTCGGTTCTGTCACAGCCGCTATTGT 500
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 501 CGGACTGGCTGTCGGGACATTGCTCGGACTCGGATTTCAGCATACCCTGC 550
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 551 TGTACATTGTCATTCCGATCATGGCTGGAGGAGTCGGAGAAGGCGCTATC 600
BSNT_05935 0 -------------------------------------------------- 0
BSU38770___ci 601 CCGCTGTCCATCGGATATTCTGACATCATGCCCATTTCTCAAGGGGAAGC 650
BSNT_05935 1 -------------------------ATGCTGGGCAGCTTGTGCGCGATTA 25
|||||||||||||||||||||||||
BSU38770___ci 651 GTTTGCACTTGTTCTGCCATCGATTATGCTGGGCAGCTTGTGCGCGATTA 700
BSNT_05935 26 TTCTAGCGGGATTGCTGAACCGAATCGGAAAGAAAAAACCGGAATGGACA 75
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 701 TTCTAGCGGGATTGCTGAACCGAATCGGAAAGAAAAAACCGGAATGGACA 750
BSNT_05935 76 GGCAACGGCAAAGTGGACCGCTCCGAAGAAGAGTCCCCTGCGCTGGAGGA 125
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 751 GGCAACGGCAAAGTGGACCGCTCCGAAGAAGAGTCCCCTGCGCTGGAGGA 800
BSNT_05935 126 ATCACAAAGCGGACAGCAAATGTTCAACCTTTCTTTATTTGCGGCAGGCG 175
|||.|||||||||||||||||||||||||||||||||||||||.||||||
BSU38770___ci 801 ATCTCAAAGCGGACAGCAAATGTTCAACCTTTCTTTATTTGCGTCAGGCG 850
BSNT_05935 176 GTATCCTTGCTGTTTCTTTATACTTAGTCGGCATGCTCGCTCACGATTTT 225
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 851 GTATCCTTGCTGTTTCTTTATACTTAGTCGGCATGCTCGCTCACGATTTT 900
BSNT_05935 226 TTCGGTTTTCCGGCACCCGTTGCCATGCTGTTACTGGCTGTTCTAATCAA 275
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 901 TTCGGTTTTCCGGCACCCGTTGCCATGCTGTTACTGGCTGTTCTAATCAA 950
BSNT_05935 276 GCTGTTCAGATTGGTGCCTGCCTCAATTGAAAATGGCGCGTTTGGAGTGT 325
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 951 GCTGTTCAGATTGGTGCCTGCCTCAATTGAAAATGGCGCGTTTGGAGTGT 1000
BSNT_05935 326 CCCGCTTCTTTTCAACAGCTGTGACCTACCCGCTTCTCTTTGCGATTGGG 375
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 1001 CCCGCTTCTTTTCAACAGCTGTGACCTACCCGCTTCTCTTTGCGATTGGG 1050
BSNT_05935 376 GTATCCATGACGCCGTGGGACAAGCTTGTCGCCGCTTTTAACCTCAGCAA 425
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 1051 GTATCCATGACGCCGTGGGACAAGCTTGTCGCCGCTTTTAACCTCAGCAA 1100
BSNT_05935 426 TATTATTACGATTCTGTCTGTCGTTGTGACCATGATGGCCGTTGGCTTCT 475
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU38770___ci 1101 TATTATCACGATTCTGTCTGTCGTTGTGACCATGATGGCCGTTGGCTTCT 1150
BSNT_05935 476 TCACTGGAAAATGGCTGAACATGTATCCGATTGAAACCGCCATTATCAAT 525
||||||||||||||||||||||||||||||||||||||||||||||.|||
BSU38770___ci 1151 TCACTGGAAAATGGCTGAACATGTATCCGATTGAAACCGCCATTATTAAT 1200
BSNT_05935 526 GCGTGCCATTCTGGACAAGGCGGCACCGGAGACGTCGCTATTTTAAGCGC 575
||.|||||||||||.|||||||||||.||.|||||.||.|||||||||||
BSU38770___ci 1201 GCATGCCATTCTGGGCAAGGCGGCACGGGTGACGTTGCCATTTTAAGCGC 1250
BSNT_05935 576 GGCGGAAAGGCTTGAGTTGATGCCGTTCGCCCAGGTATCTACCCGCATCG 625
.||.||||||||||||.|.|||||.|||||||||||.|||||||||||||
BSU38770___ci 1251 CGCTGAAAGGCTTGAGCTAATGCCTTTCGCCCAGGTGTCTACCCGCATCG 1300
BSNT_05935 626 GGGGCGCGATCACAGTGTCCTTAACCTTATTGCTGCTTCACCAGTTTTAT 675
||||||||||.|||||.||||||||||||||||||||.||||||||||||
BSU38770___ci 1301 GGGGCGCGATTACAGTATCCTTAACCTTATTGCTGCTGCACCAGTTTTAT 1350
BSNT_05935 676 TGA 678
|||
BSU38770___ci 1351 TGA 1353
#---------------------------------------
#---------------------------------------
Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.