Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_05936 and BSU38780
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:17
# Commandline: needle
# -asequence dna-align/BSNT_05936___yxkI.1.22522.seq
# -bsequence dna-align/BSU38780___yxkI.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_05936___yxkI-BSU38780___yxkI.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05936___yxkI-BSU38780___yxkI.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05936___yxkI
# 2: BSU38780___yxkI
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1689
# Identity: 1633/1689 (96.7%)
# Similarity: 1633/1689 (96.7%)
# Gaps: 6/1689 ( 0.4%)
# Score: 7965.0
#
#
#=======================================
BSNT_05936___ 1 ------ATGGGAACTCATCTATTTCTCTTTATGCTTCTCGGGCTTGGATT 44
||||||||||||||||||||||||||||||||||||||.|||||
BSU38780___yx 1 ATGCCTATGGGAACTCATCTATTTCTCTTTATGCTTCTCGGGCTGGGATT 50
BSNT_05936___ 45 TTATTTGATATCAGCCCTGGCAGCAAAACTCATTCCGGCCGTAGACTTCT 94
||||||||||||||||||.||.||||||||||||||||||.|||||||||
BSU38780___yx 51 TTATTTGATATCAGCCCTAGCTGCAAAACTCATTCCGGCCATAGACTTCT 100
BSNT_05936___ 95 GGATTGATATTGTTCTTTGGGTCGGCGCTGCAGTTTATATCTTCTCTCAT 144
||||||||||||||||.||||||||||||||.|.|||.||||||||||||
BSU38780___yx 101 GGATTGATATTGTTCTATGGGTCGGCGCTGCGGCTTACATCTTCTCTCAT 150
BSNT_05936___ 145 CTCTCATTCATGGACGGCATTGTCTCAATCGCGACAATGTTCTACTGCTA 194
|||||||||||||||||||||||||||.||||||||||||||||||||||
BSU38780___yx 151 CTCTCATTCATGGACGGCATTGTCTCACTCGCGACAATGTTCTACTGCTA 200
BSNT_05936___ 195 TTGGACCGCAATGGATCTCATTGTTTCAGAGCGTGCGGAAAAACCTTCGG 244
|||||||||||||||||||||||||||||||||||.||||||||||||||
BSU38780___yx 201 TTGGACCGCAATGGATCTCATTGTTTCAGAGCGTGTGGAAAAACCTTCGG 250
BSNT_05936___ 245 GAGACTGGCAGAAAATTGAGCTGGCCAGAAACAAAACACGTCTCCTGTCA 294
|||||||||||.||||.|||||.||||.||||||||||||.|||||||||
BSU38780___yx 251 GAGACTGGCAGGAAATCGAGCTTGCCAAAAACAAAACACGCCTCCTGTCA 300
BSNT_05936___ 295 GACATTACGCTGACCGCCATTGTGTTTGCAGGGGCTGTTATTTTTTTCAT 344
||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU38780___yx 301 GACATTACGCTGACCGCCATTGTGTTTGCAGGGGCTGTCATTTTTTTCAT 350
BSNT_05936___ 345 CTATGGACCTGACCCAAGCCCCCTCAAATATGTAATCCTTTTCGGCATGA 394
|||||||||||||.|||||||.|||||||||||.||||||.||||.||||
BSU38780___yx 351 CTATGGACCTGACACAAGCCCTCTCAAATATGTGATCCTTCTCGGAATGA 400
BSNT_05936___ 395 TCTCCGGCGGAGGGGCACTGGTGAAGCGTATACTGAATGTTTTCAGCGTA 444
|||||||||||||||||||.||||||||.||||||||||||||.||||||
BSU38780___yx 401 TCTCCGGCGGAGGGGCACTTGTGAAGCGAATACTGAATGTTTTTAGCGTA 450
BSNT_05936___ 445 AAGGTTTTTTATTCAGCTGCCTTAGAAAAATTGCATATCAGCTCACACTA 494
|||||||||||||||||.||||||||||||||||||||||||||||||||
BSU38780___yx 451 AAGGTTTTTTATTCAGCAGCCTTAGAAAAATTGCATATCAGCTCACACTA 500
BSNT_05936___ 495 TGAAACCCGTACATACCCGCTTTCCGATTTGAAGGATATTCAGCTTGAAT 544
||||||||||||||||||||||||||||||||||.|.|||||||||||||
BSU38780___yx 501 TGAAACCCGTACATACCCGCTTTCCGATTTGAAGAACATTCAGCTTGAAT 550
BSNT_05936___ 545 CAACGGCAGATCTCTTAAAGCTCCATCCGCTTCTGACGATGTATTCATCC 594
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 551 CAACAGCAGATCTCTTAAAGCTCCATCCGCTTCTGACGATGTATTCATCC 600
BSNT_05936___ 595 CGTTTAGATTTGACAACAAGCTTTCAGCAAGTCATTAAACTGTCTCTTCC 644
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 601 CGTTTAGATTTGACAACAAGCTTTCAGCAAGTCATTAAACTGTCTCTTCC 650
BSNT_05936___ 645 CGGCGAAACACTGTTTCTGACGGTGAAGGAACCGCAAAAATGGAAAACAA 694
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 651 CGGCGAAACACTGTTTCTGACGGTGAAGGAACCGCAAAAATGGAAAACAA 700
BSNT_05936___ 695 TTCTCCAGGAATACACAGATGCAGAAAACAATGTGGACAATGTGATTTCT 744
||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 701 TTCTTCAGGAATACACAGATGCAGAAAACAATGTGGACAATGTGATTTCT 750
BSNT_05936___ 745 GTTTTGCCGTTTTATCATAGAAAAAATGTGAAGCGGCTGCTCGGGAAGCT 794
||||||||||||||||||.|||||||||||||||||||||||||.|||||
BSU38780___yx 751 GTTTTGCCGTTTTATCATCGAAAAAATGTGAAGCGGCTGCTCGGTAAGCT 800
BSNT_05936___ 795 TTATTTTGCCGCCAGCGTAAAAGGGGTATCCGCTTACGCCTTATTGGTGC 844
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 801 TTATTTTGCCGCCAGCGTAAAAGGGGTATCCGCTTACGCCTTATTGGTGC 850
BSNT_05936___ 845 TCGCGTTATACGCATTACACGCCTCTCCATGGGTCATGGCTGTTGCCGTA 894
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 851 TCGCGTTATACGCATTACACGCCTCTCCATGGGTCATGGCTGTTGCCGTA 900
BSNT_05936___ 895 ATCCTATATTGGGTATTCAACATGTATATGTCAGACCGTGTGTTACGGGC 944
||||||||||||||||||||||||||||||||||||||||||||.|||||
BSU38780___yx 901 ATCCTATATTGGGTATTCAACATGTATATGTCAGACCGTGTGTTGCGGGC 950
BSNT_05936___ 945 GGCAATGGACGCCAAGCCTTGTCATCATCCGCATGTACAGGCAGCGGCCG 994
|||.||||||||||||.|||||||||||||||||||||||||.|||||||
BSU38780___yx 951 GGCGATGGACGCCAAGTCTTGTCATCATCCGCATGTACAGGCCGCGGCCG 1000
BSNT_05936___ 995 ATAAGATTTTCCGATCGGCCGGCATTTCCCATGTCCGCATATACGAAACG 1044
|||||||||||.||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1001 ATAAGATTTTCAGATCGGCCGGCATTTCCCATGTCCGCATATACGAAACG 1050
BSNT_05936___ 1045 GAGAGTGATGATTACAACGGAATGGCAGTAGGCATGAATGTCGGGAGGTC 1094
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1051 GAGAGTGATGATTACAACGGAATGGCAGTAGGCATGAATGTCGGGAGGTC 1100
BSNT_05936___ 1095 AATGGTCATCCTGACAAGCGCCACACTAACACTTCCACAGCGTGTCATTG 1144
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1101 AATGGTCATCCTGACAAGCGCCACACTAACACTTCCACAGCGTGTCATTG 1150
BSNT_05936___ 1145 AAGGCATTCTGGCCCATGAGGCGATTCATATCAAAAAACGTGACGTTCTG 1194
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1151 AAGGCATTCTGGCCCATGAGGCGATTCATATCAAAAAACGTGACGTTCTG 1200
BSNT_05936___ 1195 TCATCACAGCTTTTGCGTTTTCTATATCTTGGAGCTGTCGTTGGAATTTT 1244
|||||||||||||||||||||||||||||||||||||||||.||.|||||
BSU38780___yx 1201 TCATCACAGCTTTTGCGTTTTCTATATCTTGGAGCTGTCGTGGGGATTTT 1250
BSNT_05936___ 1245 CCTCTTATTTGAGCAGCATATCACCCATCCCGAGGCCCACAAAATTGCGC 1294
||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1251 CCTCTTGTTTGAGCAGCATATCACCCATCCCGAGGCCCACAAAATTGCGC 1300
BSNT_05936___ 1295 TTTGGGCTTTCATTATGGCAATCATTATCCTGTTCCAGCTCTATCAATCC 1344
|||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38780___yx 1301 TTTGGGCTTTCATTATGGCAATCATTATCCTATTCCAGCTCTATCAATCC 1350
BSNT_05936___ 1345 TTTTGTTCACAATGGATGGAGGTGCGTGCTGACAACCTTGGCGCATCATT 1394
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1351 TTTTGTTCACAATGGATGGAGGTGCGTGCTGACAACCTTGGCGCATCATT 1400
BSNT_05936___ 1395 GCTGGGGGGCGGTTACAAACAAATGGCTGAAGCCTTGAGAATCTTGGCGG 1444
|||||..|||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1401 GCTGGACGGCGGTTACAAACAAATGGCTGAAGCCTTGAGAATCTTGGCGG 1450
BSNT_05936___ 1445 TTCGGCAGGATGAGGACATTCAAAAACAAAGTGCCTACAGCTCTGAAGCA 1494
|||||||.||||||||.||.||.||||||||||||||.||||||||||||
BSU38780___yx 1451 TTCGGCAAGATGAGGATATACAGAAACAAAGTGCCTATAGCTCTGAAGCA 1500
BSNT_05936___ 1495 GGTGAAGACGAGCTTCAAATTGATTCTCTCACCCGTGATAAAAGCTGGTT 1544
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38780___yx 1501 GGTGAAGACGAGCTTCAAATTGATTCTCTCACCCGTGATAAAAGCTGGTT 1550
BSNT_05936___ 1545 TTTCAGATTGATTGATTTTCAGTTCGCTCCTCATCCCCCTATGTATTGGC 1594
||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU38780___yx 1551 TTTCAGATTGATTGATTTTCAGTTCGCTCCTCATCCTCCTATGTATTGGC 1600
BSNT_05936___ 1595 GTGTCGGCACTTTATTGTCAAACAAAGGACATGGGGTGCTGAAGCGCTGG 1644
||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU38780___yx 1601 GTGTCGGCACTTTATTGTCAAACAAAGGACATGGGGTGCTAAAGCGCTGG 1650
BSNT_05936___ 1645 CTCAGAGACCGCCTGAAAGAATCGATCACTTTGAAATGA 1683
|||||||||||.|||||||||||||||||||||||||||
BSU38780___yx 1651 CTCAGAGACCGACTGAAAGAATCGATCACTTTGAAATGA 1689
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