Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05952 and BSU38900

See Amino acid alignment / Visit BSNT_05952 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:19
# Commandline: needle
#    -asequence dna-align/BSNT_05952___yxjM.1.22522.seq
#    -bsequence dna-align/BSU38900___yxjM.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05952___yxjM-BSU38900___yxjM.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05952___yxjM-BSU38900___yxjM.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05952___yxjM
# 2: BSU38900___yxjM
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1233
# Identity:    1156/1233 (93.8%)
# Similarity:  1156/1233 (93.8%)
# Gaps:          21/1233 ( 1.7%)
# Score: 5507.5
# 
#
#=======================================

BSNT_05952___      1 ATGAACGGACAAACTCCGGCTCGGCACTACTACAAGAAGCTTGTGCCGAG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx      1 ATGAACGGACAAACTCCGGCTCGGCACTACTACAAGAAGCTTGTGCCGAG     50

BSNT_05952___     51 CCTTATTCTCATTTTGAATTGCATACAATTTTTATCTCACCCAGCCAAAG    100
                     |||||||||||||||||||||||||||||||||||||||.|||.|.||.|
BSU38900___yx     51 CCTTATTCTCATTTTGAATTGCATACAATTTTTATCTCATCCAACTAAGG    100

BSNT_05952___    101 CTGATCCCATTTTGTTAGCATTTGTATTTGCGGTATACTTAGCATTCATT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    101 CTGATCCCATTTTGTTAGCATTTGTATTTGCGGTATACTTAGCATTCATT    150

BSNT_05952___    151 TGGATCATTCCCTATGTGGCATCCACTGCTGTTAGTTTGAGCATATTCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    151 TGGATCATTCCCTATGTGGCATCCACTGCTGTTAGTTTGAGCATATTCAT    200

BSNT_05952___    201 CGGACTCTGGCTCCTGACCGATTTCTTTTGGGCTGTTTCCGGCCAAGAGC    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    201 CGGACTCTGGCTCCTGACCGATTTCTTTTGGGCTGTTTCCGGCCAAGAGC    250

BSNT_05952___    251 AGGGAGCCGCCTTTTTTTTACTCGTATTTTTAATGGTTTATGCAGCCATA    300
                     ||||.|||||||.||||||..|.||||||||||||.|.|||||.|||.|.
BSU38900___yx    251 AGGGTGCCGCCTATTTTTTGATTGTATTTTTAATGATATATGCCGCCTTT    300

BSNT_05952___    301 AAGCTTCCTGCACGGCTGTCTTTGATCCTTACAGTGTGCCTAATTGGGGG    350
                     |..||.|||.|||||||.||.||||||.|.||||..||..|||||||.||
BSU38900___yx    301 AGACTCCCTTCACGGCTATCCTTGATCTTCACAGCATGTTTAATTGGAGG    350

BSNT_05952___    351 CAATGCTTTCTTTTT----GTATTCTGTTTTTGACA-----GCAGCTGGG    391
                     |||      |.|.||    .|||.|      |.|||     |.||||.|.
BSU38900___yx    351 CAA------CATATTACTCCTATCC------TCACAAGGGGGAAGCTTGA    388

BSNT_05952___    392 ACGATATCATCAGCAACATCTCGATCATGATCGGACTCTACGTCTTCTTC    441
                     |....||||||||||||||||||||||||.||||.||.||||||.|||||
BSU38900___yx    389 ATACCATCATCAGCAACATCTCGATCATGCTCGGTCTGTACGTCCTCTTC    438

BSNT_05952___    442 TCCTCCATGCGTTTCAGACGAGAAGCGAGAAAGGAGGCTGAACGGAATCA    491
                     |||||||||||||||||||||||||||||||.||||||||||||||||||
BSU38900___yx    439 TCCTCCATGCGTTTCAGACGAGAAGCGAGAAGGGAGGCTGAACGGAATCA    488

BSNT_05952___    492 TGCTGAATTGGCAAAAATGCATGTGCAGCTGGAGCATGCTCATAAAGAAC    541
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    489 TGCTGAATTGGCAAAAATGCATGTGCAGCTGGAGCATGCTCATAAAGAAC    538

BSNT_05952___    542 TCCAGAAAGCGCATGCAGAGCTGCAGGAGGCTTCTGTTCTTTCATTAAGG    591
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    539 TCCAGAAAGCGCATGCAGAGCTGCAGGAGGCTTCTGTTCTTTCATTAAGG    588

BSNT_05952___    592 TACGCGGTCCTTGAGGAACGTACAAGAATCGCCCGCGACATTCATGACAG    641
                     |||||||||||||||||||||||||||||.||||||||||||||||||||
BSU38900___yx    589 TACGCGGTCCTTGAGGAACGTACAAGAATTGCCCGCGACATTCATGACAG    638

BSNT_05952___    642 TATCGGTCACGAGCTGACTTCTGTGATTGTTCAGCTTCAATCTCTTCCCT    691
                     .|||||||||||||||||||||||||||||||||||||||||.|||||||
BSU38900___yx    639 CATCGGTCACGAGCTGACTTCTGTGATTGTTCAGCTTCAATCCCTTCCCT    688

BSNT_05952___    692 ATATCCTCAAAAGCAGCAAGGAGGATTCAGAAAAAGTCATTCAAAATGTA    741
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    689 ATATCCTTAAAAGCAGCAAGGAGGATTCAGAAAAAGTCATTCAAAATGTA    738

BSNT_05952___    742 CTGAGTGTCGCCAGGGAATGTCTTCAAGAAGTACGGTCTGTCGTTCACCA    791
                     |||||||||||||||||.||||||||||||||.||||||||.||||||||
BSU38900___yx    739 CTGAGTGTCGCCAGGGAGTGTCTTCAAGAAGTGCGGTCTGTTGTTCACCA    788

BSNT_05952___    792 AATGGGCCGTAGTGAATCGATGGTGGGGCTTACCGCTTTGCGGGGGCTCA    841
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    789 AATGGGCCGTAGTGAATCGATGGTGGGGCTTACCGCTTTGCGGGGGCTCA    838

BSNT_05952___    842 TTCATCAAGTGGAGGAACGGAGCGGCTTGCACGTTTCTTTAGATACTGCC    891
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    839 TTCATCAAGTGGAGGAACGGAGCGGCTTGCACGTTTCTTTAGATACTGCC    888

BSNT_05952___    892 GGACTGTCAGAAGAGTCTTGGCCTCCAAACGTGAGCGAAACGATCTACCG    941
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    889 GGACTGTCAGAAGAGTCTTGGCCTCCAAACGTGAGCGAAACGATCTACCG    938

BSNT_05952___    942 TATCTTGCAGGAAGCGCTGACCAATATCATTCGTCACGCTGACGCTTCTC    991
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx    939 CATCTTGCAGGAAGCGCTGACCAATATCATTCGTCACGCTGACGCTTCTC    988

BSNT_05952___    992 ATGCGGCGGCCGTCATTTCTAACGACAAGTCCCATCTCTATGTCACAATC   1041
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU38900___yx    989 ATGCGGCGGCCGTCATTTCTAATGACAAGTCCCATCTCTATGTCACAATC   1038

BSNT_05952___   1042 ACCGACGAAGGACAATTCACCGGCAGCCTTACTTATGGATTTGGCCTGAC   1091
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU38900___yx   1039 ACCGACGACGGACAATTCACCGGCAGCCTTACTTATGGATTTGGCCTGAC   1088

BSNT_05952___   1092 AGGAATGAAAGAGCGCGCAGAAAAAGCAGGCGGTTCCCTTACTTTCAGTG   1141
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU38900___yx   1089 AGGAATGAAAGAGCGCGCAGAAAAAGCAGGCGGTTCCCTTACTTTCAGTG   1138

BSNT_05952___   1142 CCGTACAGCCGAGCGGCCTGAAAATTGAGCTGTCATTGCCGCTCACGACA   1191
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU38900___yx   1139 CCGTACAGCCGAGCGGCCTGAAAATTGAGCTGTCATTGCCGCTCATGACA   1188

BSNT_05952___   1192 ACGCATAAGGAGCAAAAAGATGAACAAAGATAA   1224
                     |||.|||||||||||||||||||||||||||||
BSU38900___yx   1189 ACGAATAAGGAGCAAAAAGATGAACAAAGATAA   1221


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