Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05973 and BSU39020

See Amino acid alignment / Visit BSNT_05973 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:21
# Commandline: needle
#    -asequence dna-align/BSNT_05973___yxjA.1.22522.seq
#    -bsequence dna-align/BSU39020___yxjA.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05973___yxjA-BSU39020___yxjA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05973___yxjA-BSU39020___yxjA.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05973___yxjA
# 2: BSU39020___yxjA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1194
# Identity:    1173/1194 (98.2%)
# Similarity:  1173/1194 (98.2%)
# Gaps:           0/1194 ( 0.0%)
# Score: 5781.0
# 
#
#=======================================

BSNT_05973___      1 ATGTACTTTTTACTAAACCTTGTCGGTCTCATTGTGATTATGGCAGTTGT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx      1 ATGTACTTTTTACTAAACCTTGTCGGTCTCATTGTGATTATGGCAGTTGT     50

BSNT_05973___     51 ATTCCTATGTTCTCCGCAGAAAAAGAAAATCAAGTGGCGCCCGATCATGA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||.|
BSU39020___yx     51 ATTCCTATGTTCTCCGCAGAAAAAGAAAATCAAGTGGCGCCCGATCATTA    100

BSNT_05973___    101 CGTTAATTGTTCTGGAATTGCTGATTACTTGGTTTATGCTGGGAACAAAA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    101 CGTTAATTGTTCTGGAATTGCTGATTACTTGGTTTATGCTGGGAACAAAA    150

BSNT_05973___    151 GTCGGAAGCTGGGCTATCGGTAAAATCGGTGATTTCTTCACTTGGCTGAT    200
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU39020___yx    151 GTCGGAAGCTGGGCCATCGGTAAAATCGGTGATTTCTTCACTTGGCTGAT    200

BSNT_05973___    201 TGCTTGCGCCAGTGACGGTATCGCGTTTGCCTTTCCGTCAGTGATGGCGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    201 TGCTTGCGCCAGTGACGGTATCGCGTTTGCCTTTCCGTCAGTGATGGCGA    250

BSNT_05973___    251 ATGAAACAGTAGACTTTTTCTTTAGTGCGCTTCTTCCAATTATCTTTATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    251 ATGAAACAGTAGACTTTTTCTTTAGTGCGCTTCTTCCAATTATCTTTATC    300

BSNT_05973___    301 GTCACATTCTTTGATATTTTAACGTATTTCGGTATTTTGCCTTGGCTGAT    350
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU39020___yx    301 GTCACATTCTTTGATATTTTAACGTATTTCGGCATTTTGCCTTGGCTGAT    350

BSNT_05973___    351 TGATAAAATCGGATGGGTGATTTCAAAGGCTTCCCGCTTGCCGAAATTAG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    351 TGATAAAATCGGATGGGTGATTTCAAAGGCTTCCCGCTTGCCGAAATTAG    400

BSNT_05973___    401 AAAGCTTTTTCTCTATTCAAATGATGTTTCTGGGAAATACCGAAGCACTT    450
                     ||||||||||||||||||||||||||||.||.||||||||||||||||||
BSU39020___yx    401 AAAGCTTTTTCTCTATTCAAATGATGTTCCTTGGAAATACCGAAGCACTT    450

BSNT_05973___    451 GCGGTTATCCGCCAGCAGCTAACGGTTTTAAGCAACAACCGCCTGCTCAC    500
                     |||||.||||||||||||||.|||||||||||||||||||||||||||||
BSU39020___yx    451 GCGGTCATCCGCCAGCAGCTTACGGTTTTAAGCAACAACCGCCTGCTCAC    500

BSNT_05973___    501 ATTCGGCTTAATGAGCATGAGCAGCATCAGCGGCTCCATTATCGGATCTT    550
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    501 ATTCGGTTTAATGAGCATGAGCAGCATCAGCGGCTCCATTATCGGATCTT    550

BSNT_05973___    551 ATCTGTCAATGGTGCCTGCGACATACTTGTTTACAGCCATTCCTTTGAAC    600
                     ||||.|||||||||||||||||||||.|||||||||||||||||||||||
BSU39020___yx    551 ATCTTTCAATGGTGCCTGCGACATACGTGTTTACAGCCATTCCTTTGAAC    600

BSNT_05973___    601 TGCTTAAACGCGCTGATTATCGCAAACCTGCTGAATCCTGTTCACGTGCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    601 TGCTTAAACGCGCTGATTATCGCAAACCTGCTGAATCCTGTTCACGTGCC    650

BSNT_05973___    651 TGAGGATGAAGATATCATCTATACACCGCCTAAAGAAGAGAAGAAAGACT    700
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    651 GGAGGATGAAGATATCATCTATACACCGCCTAAAGAAGAGAAGAAAGACT    700

BSNT_05973___    701 TTTTCTCTACGATTTCTAACAGTATGCTTGTCGGCATGAACATGGTTATC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    701 TTTTCTCTACGATTTCTAACAGTATGCTTGTCGGCATGAACATGGTTATC    750

BSNT_05973___    751 GTTATTTTAGCAATGGTGATCGGATATGTCGCATTAACGTCAGCAGTTAA    800
                     ||||||||.|||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    751 GTTATTTTGGCAATGGTGATCGGATATGTCGCATTAACGTCAGCAGTTAA    800

BSNT_05973___    801 TGGCATTCTTGGCGTTTTCGTACACGGCCTGACCATCCAGACGATTTTTG    850
                     ||||||||||||||||||||||||.|||||||||||||||||.|||||||
BSU39020___yx    801 TGGCATTCTTGGCGTTTTCGTACATGGCCTGACCATCCAGACAATTTTTG    850

BSNT_05973___    851 CTTATCTGTTCAGTCCATTCGCATTCCTGCTTGGATTGCCAGTGCACGAT    900
                     ||||||||||||||||.||||||||||||||||||.||||||||||||||
BSU39020___yx    851 CTTATCTGTTCAGTCCGTTCGCATTCCTGCTTGGACTGCCAGTGCACGAT    900

BSNT_05973___    901 GCGATGTATGTTGCTCAGCTGATGGGCATGAAATTAGCAACGAACGAGTT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    901 GCGATGTATGTTGCTCAGCTGATGGGCATGAAATTAGCAACGAACGAGTT    950

BSNT_05973___    951 TGTTGCGATGCTTGACTTGAAAAACAATCTCAAATCCCTTCCGCCTCACA   1000
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx    951 TGTTGCGATGCTTGACTTGAAAAACAATCTCAAATCCCTTCCGCCTCACA   1000

BSNT_05973___   1001 CCGTTGCGGTGGCGACGACATTCCTGACGTCCTTTGCAAACTTCAGTACG   1050
                     |||||||||||||||||||||||||||||||||||||||||||||||||.
BSU39020___yx   1001 CCGTTGCGGTGGCGACGACATTCCTGACGTCCTTTGCAAACTTCAGTACT   1050

BSNT_05973___   1051 GTCGGCATGATTTACGGCACGTACAATTCGATCCTTGACGGAGAAAAATC   1100
                     |||||||||||||||||||||||||||||||||||||||||||||||.||
BSU39020___yx   1051 GTCGGCATGATTTACGGCACGTACAATTCGATCCTTGACGGAGAAAAGTC   1100

BSNT_05973___   1101 AACGGTCATCGGGAGAAACGTGTGGAAACTGATCGTAAGCGGAATTGCAG   1150
                     |||||||||||||||||||||||||||||||.||||.|||||||||||.|
BSU39020___yx   1101 AACGGTCATCGGGAGAAACGTGTGGAAACTGCTCGTCAGCGGAATTGCGG   1150

BSNT_05973___   1151 TATCTTTATTAAGTGCTGCGATTGTCGGCCTGTTTGTGTGGTAG   1194
                     ||||||||||||||||||||||||||||||||||||||||||||
BSU39020___yx   1151 TATCTTTATTAAGTGCTGCGATTGTCGGCCTGTTTGTGTGGTAG   1194


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