Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05986 and BSU39100

See Amino acid alignment / Visit BSNT_05986 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:22
# Commandline: needle
#    -asequence dna-align/BSNT_05986___yxiO.1.22522.seq
#    -bsequence dna-align/BSU39100___yxiO.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05986___yxiO-BSU39100___yxiO.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05986___yxiO-BSU39100___yxiO.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05986___yxiO
# 2: BSU39100___yxiO
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1287
# Identity:    1260/1287 (97.9%)
# Similarity:  1260/1287 (97.9%)
# Gaps:           0/1287 ( 0.0%)
# Score: 6192.0
# 
#
#=======================================

BSNT_05986___      1 ATGATGAAACGTTTTACGAAACAAGAAAACAGCTGGGTATTATATGACTG     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU39100___yx      1 ATGATGAAACGTTTTACGAAACAAGAAAACAGCTGGGTGTTATATGACTG     50

BSNT_05986___     51 GGCAAATTCTGCTTACTCAATTGTCGTGACCACCGCGGTATTTCCGTTAT    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU39100___yx     51 GGCAAATTCAGCTTACTCAATTGTCGTGACCACCGCGGTATTTCCGTTAT    100

BSNT_05986___    101 TTTATAAATCAGCAGCTGCGGAAAGCGGTGTCAGCGCCGCTCAATCGACT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    101 TTTATAAATCAGCAGCTGCGGAAAGCGGTGTCAGCGCCGCTCAATCGACT    150

BSNT_05986___    151 GCCTATCTGGGCTATACCATTGCGATTTCAACGTTTATTCTTGCGATGCT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    151 GCCTATCTGGGCTATACCATTGCGATTTCAACGTTTATTCTTGCGATGCT    200

BSNT_05986___    201 CGGTCCTATTTTAGGCACAATCGCCGACTATGAAGGGTGCAAGAAAAAGT    250
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    201 CGGCCCTATTTTAGGCACAATCGCCGACTATGAAGGGTGCAAGAAAAAGT    250

BSNT_05986___    251 TCTTCGGTTTCTTTGTGTCAGCCGGTGTCGCCAGCACCGCGATGCTCGCC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    251 TCTTCGGTTTCTTTGTGTCAGCCGGTGTCGCCAGCACCGCGATGCTCGCC    300

BSNT_05986___    301 TTTATCCCAAGTGAGCATTGGCTGCTATTGCTACTGTTTTATACGATATC    350
                     ||||||||.|||||.|||||||||||||||.|.||||||||||||.||||
BSU39100___yx    301 TTTATCCCTAGTGAACATTGGCTGCTATTGTTGCTGTTTTATACGGTATC    350

BSNT_05986___    351 GGCTATCGGTTTTTCCGGCGCCAATGTGTTTTATGATGCCTTTCTCGTGG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    351 GGCTATCGGTTTTTCCGGCGCCAATGTGTTTTATGATGCCTTTCTCGTGG    400

BSNT_05986___    401 ACGTCACGCCTGAGAAACGGATGAATCTCGTCTCGGCACGGGGTTTTGGC    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||||
BSU39100___yx    401 ACGTCACGCCTGAGAAGCGGATGAATCTCGTCTCGGCACGGGGTTTTGGC    450

BSNT_05986___    451 TTAGGATACATTGGCAGCACGATTCCATTTATCATCAGTATTGCTGTCAT    500
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU39100___yx    451 TTAGGATACATTGGAAGCACGATTCCATTTATCATCAGTATTGCTGTCAT    500

BSNT_05986___    501 CCTGCTCGCACAAGCAGAGACGATTCCAGTGTCTGTATCGGCCGCAAGCC    550
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU39100___yx    501 CCTGCTCGCACAAGCAGAGACTATTCCAGTGTCTGTATCGGCCGCAAGCC    550

BSNT_05986___    551 AGCTGTCCTTTTTCATAACGGCTGCCTGGTGGGGGCTGTTCACTATCCCA    600
                     ||||||||||.||||||||||||||||||||||||||||||||.||||||
BSU39100___yx    551 AGCTGTCCTTCTTCATAACGGCTGCCTGGTGGGGGCTGTTCACCATCCCA    600

BSNT_05986___    601 ATGATTAAACATGTCCATCAACGCTATTACATCAAAAGAGAACCTCATAT    650
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU39100___yx    601 ATGATTAAACATGTCCATCAACGCTATTACATCAAAAAAGAACCTCATAT    650

BSNT_05986___    651 TGTCATCAACAGCTTTAAGCGGCTCGGCCAGACGATGAAACGGATCAGGC    700
                     ||||||||||||||||||||||||||||||.|||||||||||||||||||
BSU39100___yx    651 TGTCATCAACAGCTTTAAGCGGCTCGGCCAAACGATGAAACGGATCAGGC    700

BSNT_05986___    701 AATACCGGGCACTTTTCCTCTTTTTGCTCGCTTATTTCTTTTATATCGAC    750
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU39100___yx    701 AATACCGGGCACTTTTCCTCTTCTTGCTCGCTTATTTCTTTTATATCGAC    750

BSNT_05986___    751 GGAGTCGGCACGATTATTACGATGTCGACATCCTATGGATCAGATTTAGG    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    751 GGAGTCGGCACGATTATTACGATGTCGACATCCTATGGATCAGATTTAGG    800

BSNT_05986___    801 GATCGGTTCCTCAAGCCTCCTGATCATCCTATTTGTCACCCAGGTGGTCG    850
                     ||||||.|||||||||||.||||||||||||||||||||||||||.||||
BSU39100___yx    801 GATCGGCTCCTCAAGCCTTCTGATCATCCTATTTGTCACCCAGGTAGTCG    850

BSNT_05986___    851 CTGCACCGTTTTCGATTGTATACGGAAAACTGGCAGAACGCTTCACGGGG    900
                     |.||.||||||||||||.||||||||||||||||||||||||||||||||
BSU39100___yx    851 CCGCGCCGTTTTCGATTATATACGGAAAACTGGCAGAACGCTTCACGGGG    900

BSNT_05986___    901 AAGACCATGCTGTACGTCGGGATCGTCATTTATATGATCGTCTGCGTGTA    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx    901 AAGACCATGCTGTACGTCGGGATCGTCATTTATATGATCGTCTGCGTGTA    950

BSNT_05986___    951 TGCCTATTTTATGAAGACAACGATTGATTTCTGGATACTGGCTATGCTTG   1000
                     |||||||||||||.||||||||.|||||||||||||||||||||||||||
BSU39100___yx    951 TGCCTATTTTATGGAGACAACGCTTGATTTCTGGATACTGGCTATGCTTG   1000

BSNT_05986___   1001 TCGCCACCTCGCAGGGCGGTATTCAAGCCCTAAGCCGTTCCTATTTCGCC   1050
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU39100___yx   1001 TCGCCACCTCGCAAGGCGGTATTCAAGCCCTAAGCCGTTCCTATTTCGCC   1050

BSNT_05986___   1051 AAGCTTGTGCCAAAGCGCCACGCCAATGAATTCTTTGGCTTCTACAACAT   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx   1051 AAGCTTGTGCCAAAGCGCCACGCCAATGAATTCTTTGGCTTCTACAACAT   1100

BSNT_05986___   1101 TTTTGGAAAATTCGCCTCAATTATGGGGCCGCTACTCATTGCCGTTACCG   1150
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU39100___yx   1101 TTTTGGAAAATTCGCCTCAATTATGGGGCCGCTGCTCATTGCCGTTACCG   1150

BSNT_05986___   1151 CCCAGCTGACCGGGAAATCCTCGACTGCGGTGTTCAGCCTGATCATTTTG   1200
                     |||||||||||||.||||||||||||||||||||||||||||||||||||
BSU39100___yx   1151 CCCAGCTGACCGGTAAATCCTCGACTGCGGTGTTCAGCCTGATCATTTTG   1200

BSNT_05986___   1201 TTTGTGATTGGTATTGTGATTCTTGCCTTTGTTCCCGAGGAAACCAGCAC   1250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39100___yx   1201 TTTGTGATTGGTATTGTGATTCTTGCCTTTGTTCCCGAGGAAACCAGCAC   1250

BSNT_05986___   1251 AGATGTCAGCCAGCAGCAAAATGACCTGCCCCTTTAA   1287
                     |||||||||||||||||||||||||||||||||||||
BSU39100___yx   1251 AGATGTCAGCCAGCAGCAAAATGACCTGCCCCTTTAA   1287


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