Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_05991 and BSU39140

See Amino acid alignment / Visit BSNT_05991 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:23
# Commandline: needle
#    -asequence dna-align/BSNT_05991___yxiK.1.22522.seq
#    -bsequence dna-align/BSU39140___yxiK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_05991___yxiK-BSU39140___yxiK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_05991___yxiK-BSU39140___yxiK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_05991___yxiK
# 2: BSU39140___yxiK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 462
# Identity:     404/462 (87.4%)
# Similarity:   404/462 (87.4%)
# Gaps:           9/462 ( 1.9%)
# Score: 1824.0
# 
#
#=======================================

BSNT_05991___      1 ATGGAAATAACCTCTATAAGCAGTATCGGAAATTTAGATATGGTCGATCT     50
                     ||||||||||||||||||||||||||.||.|||||.||.|||.||||.||
BSU39140___yx      1 ATGGAAATAACCTCTATAAGCAGTATTGGCAATTTGGACATGATCGAGCT     50

BSNT_05991___     51 AAAGCCTGACCAAATTGTTATGTCGTGTGAACTTGAAGATGCAGAGTCGT    100
                     .|||||||||||||..||||||.|.||.||||||||||||||||||||||
BSU39140___yx     51 TAAGCCTGACCAAACCGTTATGGCATGCGAACTTGAAGATGCAGAGTCGT    100

BSNT_05991___    101 TTTATCGTGTATGGCAAGGGCTTGCCTATGAGCGAATTATGATACAGGTG    150
                     ||||||||.|.|||..||||||||||||.||.|||||.|||||||||||.
BSU39140___yx    101 TTTATCGTTTTTGGGCAGGGCTTGCCTACGATCGAATCATGATACAGGTA    150

BSNT_05991___    151 ATAACGACTGGTTCATTTATAGAAGACCTATCCAAGTACTTTGAAGGTTA    200
                     |||||||||||||||||||||||||||||.|||.||||.|||||||||.|
BSU39140___yx    151 ATAACGACTGGTTCATTTATAGAAGACCTGTCCGAGTATTTTGAAGGTCA    200

BSNT_05991___    201 TGCTTACAAGGTGACGAAGCTGGCGAAACGAGAATTTCATTTTCAATCTG    250
                     ||||||||||||||||||||||||.|||.|.|||||.|||||.|||||..
BSU39140___yx    201 TGCTTACAAGGTGACGAAGCTGGCCAAAAGGGAATTCCATTTCCAATCCA    250

BSNT_05991___    251 TATTACAGAAAGCAGACCGGGACATTGCAGGCTTTCTCTTTCTGTTAGCT    300
                     ||||||||.|||||||||||||.|||||||..||||||||||||.|||||
BSU39140___yx    251 TATTACAGGAAGCAGACCGGGATATTGCAGATTTTCTCTTTCTGCTAGCT    300

BSNT_05991___    301 TCTATTAATGACGATGTTTTTCTGATCACTGATCCTCAACCGGATAAAAG    350
                     ||.||.|||||.||||||||||||||||||||||||||||||||||||||
BSU39140___yx    301 TCCATCAATGATGATGTTTTTCTGATCACTGATCCTCAACCGGATAAAAG    350

BSNT_05991___    351 CTATTTTTCCGATGGGAAGCTCCAATGCCTAACAGACTCAGGCGAACGGA    400
                     |||||||||.||.||||||||||||||||||||.||||||||||||||||
BSU39140___yx    351 CTATTTTTCAGAAGGGAAGCTCCAATGCCTAACGGACTCAGGCGAACGGA    400

BSNT_05991___    401 TCATGTGGTTTGAATATGATGCTGTTGACATTTATATGGTTGGCGGTAAC    450
                     ||||.|||||||||||.||||||||.||||||||||||.||||||||.|.
BSU39140___yx    401 TCATATGGTTTGAATACGATGCTGTGGACATTTATATGATTGGCGGTGAA    450

BSNT_05991___    451 TAA---------    453
                     |.|         
BSU39140___yx    451 TCATATAAATAG    462


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