Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06049 and BSU39430

See Amino acid alignment / Visit BSNT_06049 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:34
# Commandline: needle
#    -asequence dna-align/BSNT_06049___deoR.1.22522.seq
#    -bsequence dna-align/BSU39430___deoR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06049___deoR-BSU39430___deoR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06049___deoR-BSU39430___deoR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06049___deoR
# 2: BSU39430___deoR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 942
# Identity:     922/942 (97.9%)
# Similarity:   922/942 (97.9%)
# Gaps:           0/942 ( 0.0%)
# Score: 4530.0
# 
#
#=======================================

BSNT_06049___      1 ATGGATCGGGAAAAACAACAATTAAGCATAGAAGCGGCAAGGCTTTACTA     50
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU39430___de      1 ATGGATCGGGAAAAACAGCAATTAAGCATAGAAGCGGCAAGGCTTTACTA     50

BSNT_06049___     51 TCAGTCTGACTACAGTCAGCAGCAAATTGCTGAGCAGCTCAACATTTCAA    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de     51 TCAGTCTGACTACAGTCAGCAGCAAATTGCTGAGCAGCTCAACATTTCAA    100

BSNT_06049___    101 GGCCAACCGTTTCCCGGCTGCTGCAATATGCAAAGGAAAAAGGGTATGTC    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    101 GGCCAACCGTTTCCCGGCTGCTGCAATATGCAAAGGAAAAAGGGTATGTC    150

BSNT_06049___    151 CAGATTCGCGTCATGGACCCTTTTGAGGATTTGGATGCGCTCGGTTCCAT    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    151 CAGATTCGCGTCATGGACCCTTTTGAGGATTTGGATGCGCTCGGTTCCAT    200

BSNT_06049___    201 ACTTGAAGAGAAATACGGGCTCCTTGAGGCGCATGTTGTGTTTTCCCCGA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    201 ACTTGAAGAGAAATACGGGCTCCTTGAGGCGCATGTTGTGTTTTCCCCGA    250

BSNT_06049___    251 CACCCGATTATGCAGGAATTACACATGACCTAAGCCGCTATGGTGCAGAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    251 CACCCGATTATGCAGGAATTACACATGACCTAAGCCGCTATGGTGCAGAA    300

BSNT_06049___    301 TATATGCATGAAACGGTAAAAGACGGCGACATTGTCGGCGTCAGCTGGGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    301 TATATGCATGAAACGGTAAAAGACGGCGACATTGTCGGCGTCAGCTGGGG    350

BSNT_06049___    351 AACTACCATGTATCAAATCGCGCAAAACATGCAGCCGAAGCAAGTAAAAG    400
                     |||.||||||||||||||||||||||||||||||||||||||.|||||||
BSU39430___de    351 AACCACCATGTATCAAATCGCGCAAAACATGCAGCCGAAGCAGGTAAAAG    400

BSNT_06049___    401 GCGTCGAGGTCGTCCAACTGAAAGGCGGCATCAGCCATTCCCGGGTAAGC    450
                     ||||||||||||||||.|||||||||||||||||||||||||||||||.|
BSU39430___de    401 GCGTCGAGGTCGTCCAGCTGAAAGGCGGCATCAGCCATTCCCGGGTAAAC    450

BSNT_06049___    451 ACGTATTCGGCTGAAACGATTCAGCTGTTTGCGGAGGCTTTTCAAACGAT    500
                     ||||||||||||||||||||||||||||||||.|||||||||||||||||
BSU39430___de    451 ACGTATTCGGCTGAAACGATTCAGCTGTTTGCAGAGGCTTTTCAAACGAT    500

BSNT_06049___    501 GCCGCGCTATCTCCCGCTTCCCGTCGTGTTTGATAATGCGGATGTGAAGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    501 GCCGCGCTATCTCCCGCTTCCCGTCGTGTTTGATAATGCGGATGTGAAGC    550

BSNT_06049___    551 GAATGGTGGAGAAAGACCGTCATATTGAGCGGATCATCGAGATGGGAAAG    600
                     ||||||||||||||||||||||||||||.||||||||.||||||||.|||
BSU39430___de    551 GAATGGTGGAGAAAGACCGTCATATTGAACGGATCATTGAGATGGGCAAG    600

BSNT_06049___    601 CAGGCGAATATCGCTCTCTTCACGGTGGGGACCGTTCGTGACGAAGCGCT    650
                     ||||||||||||||||||||.|||||.|||||.||.|||||.||||||||
BSU39430___de    601 CAGGCGAATATCGCTCTCTTTACGGTCGGGACTGTCCGTGATGAAGCGCT    650

BSNT_06049___    651 GCTGTTCCGGCTCGGATATTTTAACGAAGAAGAGAAAGCCCTGCTGAAAA    700
                     |.||||.|||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    651 GTTGTTTCGGCTCGGATATTTTAACGAAGAAGAGAAAGCCCTGCTGAAAA    700

BSNT_06049___    701 AACAGGCCGTGGGTGATATTTGTTCACGCTTTTTTGATGCGAAAGGGAAT    750
                     ||||||||||.||.||||||||||||||||||||||||||||||||||||
BSU39430___de    701 AACAGGCCGTCGGGGATATTTGTTCACGCTTTTTTGATGCGAAAGGGAAT    750

BSNT_06049___    751 ATTTGCAGCAGCGCCATCAATGACCGGACCATCGGTGTTGAGCTTGAAGA    800
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU39430___de    751 ATTTGCAGCAGCGCCATCAATGACCGGACCATCGGTGTTGAGCTTCAAGA    800

BSNT_06049___    801 CCTCAGACTGAAGGAACGCTCCATTTTAGTTGCCGGCGGAAGCAGAAAAG    850
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    801 CCTTAGACTGAAGGAACGCTCCATTTTAGTTGCCGGCGGAAGCAGAAAAG    850

BSNT_06049___    851 TATCTTCCATTCACGGAGCATTAACCGGAAAATATGCCAACGTTTTAATC    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    851 TATCTTCCATTCACGGAGCATTAACCGGAAAATATGCCAACGTTTTAATC    900

BSNT_06049___    901 ATTGACCAGCATACCGCGAGGGCGCTTGTTAATGATTTGTGA    942
                     ||||||||||||||||||||||||||||||||||||||||||
BSU39430___de    901 ATTGACCAGCATACCGCGAGGGCGCTTGTTAATGATTTGTGA    942


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