Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

Home

About

Browser

Genes

Download

Publications

DNA alignment: BSNT_06052 and BSU39440

See Amino acid alignment / Visit BSNT_06052 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:35
# Commandline: needle
#    -asequence dna-align/BSNT_06052___yxxB.1.22522.seq
#    -bsequence dna-align/BSU39440___yxxB.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06052___yxxB-BSU39440___yxxB.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06052___yxxB-BSU39440___yxxB.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06052___yxxB
# 2: BSU39440___yxxB
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     809/828 (97.7%)
# Similarity:   809/828 (97.7%)
# Gaps:           0/828 ( 0.0%)
# Score: 3971.0
# 
#
#=======================================

BSNT_06052___      1 ATGGCGGTGAAAGACCGGTACATGTCAAAAATAAAACAGGAAACCAAGCC     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx      1 ATGGCGGTGAAAGACCGGTACATGTCAAAAATAAAACAGGAAACCAAGCC     50

BSNT_06052___     51 TTGGATCAAGCGATTCGGGAGGCTTGGTTATTTTGCATTCGGCGGCGTTT    100
                     |||||||||.||||||||||||||||||||||||||||||||||||||||
BSU39440___yx     51 TTGGATCAAACGATTCGGGAGGCTTGGTTATTTTGCATTCGGCGGCGTTT    100

BSNT_06052___    101 TTATTCTGCTTGGGGTTTTGGCCTTTATGACGGCTGCCGGGGCAGGCCGC    150
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU39440___yx    101 TTATTCTGCTTGGGGTTTTGGCTTTTATGACGGCTGCCGGGGCAGGCCGC    150

BSNT_06052___    151 GCGAAAGATTCGAGCGGAGCTCTCCAAACGCTATCACGCATGCCGTATGG    200
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx    151 GCCAAAGATTCGAGCGGAGCTCTCCAAACGCTATCACGCATGCCGTATGG    200

BSNT_06052___    201 GTCACTATTGCTTTTTTTAATAGGCATCGGCGTTATCGGCTATGTGATCT    250
                     ||||||||||||||||||.||||||||||||.||||||||||||||||||
BSU39440___yx    201 GTCACTATTGCTTTTTTTTATAGGCATCGGCCTTATCGGCTATGTGATCT    250

BSNT_06052___    251 GGACGGTGTTAAGCGCGATCAAGGACACGGAGGGGCACGGAAACAGCAGG    300
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx    251 GGATGGTGTTAAGCGCGATCAAGGACACGGAGGGGCACGGAAACAGCAGG    300

BSNT_06052___    301 CGAGGCCTGTCACGGAGAATAGGAAACTTTTTCAGTGCCGCCGTTTACAC    350
                     |||||||||||.|||||||||||||||||||||||||||||.||||||||
BSU39440___yx    301 CGAGGCCTGTCGCGGAGAATAGGAAACTTTTTCAGTGCCGCTGTTTACAC    350

BSNT_06052___    351 ATCCATCGCTTGGAATGCCTTGCGGTTTGTGTTTGGCCAAGGGGACGGCG    400
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU39440___yx    351 ATCCATCGCTTGGAATGCCTTGCGATTTGTGTTTGGCCAAGGGGACGGCG    400

BSNT_06052___    401 GCACTTCAGAACAGACGTGGTCCGCTTATGTATTGGCGCAGCCGTTCGGC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx    401 GCACTTCAGAACAGACGTGGTCCGCTTATGTATTGGCGCAGCCGTTCGGC    450

BSNT_06052___    451 CAATGGCTCACAGGGCTTACGGGTGCGGGTTTTATCGTATTTGCGATTGT    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx    451 CAATGGCTCACAGGGCTTACGGGTGCGGGTTTTATCGTATTTGCGATTGT    500

BSNT_06052___    501 TCAGTTTGTGAAAGGCATTCGGGCTGCTTTTATGAAAGAATTCGACACGT    550
                     |||.|||.||||||||.||||||||||||||||||||||||||||.||.|
BSU39440___yx    501 TCAATTTATGAAAGGCGTTCGGGCTGCTTTTATGAAAGAATTCGATACAT    550

BSNT_06052___    551 CAAAAATGAACAAACAGATGATATGCATCACGAAAAACACCGGACGCGCA    600
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU39440___yx    551 CAAAAATGAACAAACAGATGATATGCATCACGAAAAACACAGGACGCGCA    600

BSNT_06052___    601 GGCAATATCGCCCGGGCCATTATTTTCTCGGCTATCNGCTATTTTCTCAT    650
                     |||||||||||||||||||||||||||||||||||| |||||||||||||
BSU39440___yx    601 GGCAATATCGCCCGGGCCATTATTTTCTCGGCTATCGGCTATTTTCTCAT    650

BSNT_06052___    651 CAAGACAGCCATGACCGCTGATCCCGACGACACAAGAGGCTTTGACGGCG    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx    651 CAAGACAGCCATGACCGCTGATCCCGACGACACAAGAGGCTTTGACGGCG    700

BSNT_06052___    701 CGCTCGCCGAACTCGCGCAGCAGCCGCATGGCAAATTGATTCTGTCTATG    750
                     |||||||.|||||||||||||||||||||||||||||||||||||||||.
BSU39440___yx    701 CGCTCGCAGAACTCGCGCAGCAGCCGCATGGCAAATTGATTCTGTCTATA    750

BSNT_06052___    751 TTGGCATTAGGCCTGATCCTATATGGAATGTACGCCATTATGAAAGGCAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39440___yx    751 TTGGCATTAGGCCTGATCCTATATGGAATGTACGCCATTATGAAAGGCAT    800

BSNT_06052___    801 TTATCAGCATATGACCTGGGAGAAGTAA    828
                     |||||||||||||||.||||||||||||
BSU39440___yx    801 TTATCAGCATATGACTTGGGAGAAGTAA    828


#---------------------------------------
#---------------------------------------

Copyright (C) Natto Genome Project, 2009-2010. All rights reserved.