Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06055 and BSU39450

See Amino acid alignment / Visit BSNT_06055 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:35
# Commandline: needle
#    -asequence dna-align/BSNT_06055___yxeR.1.22522.seq
#    -bsequence dna-align/BSU39450___yxeR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06055___yxeR-BSU39450___yxeR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06055___yxeR-BSU39450___yxeR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06055___yxeR
# 2: BSU39450___yxeR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1113
# Identity:    1081/1113 (97.1%)
# Similarity:  1081/1113 (97.1%)
# Gaps:           0/1113 ( 0.0%)
# Score: 5277.0
# 
#
#=======================================

BSNT_06055___      1 ATGACGGTGAATGACGCGGTTGTATTCATTTTGGCTGCCTTTTTACTATG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx      1 ATGACGGTGAATGACGCGGTTGTATTCATTTTGGCTGCCTTTTTACTATG     50

BSNT_06055___     51 GGGAGCGGCGGATTATTGTTTGGGAAACAGATGGGGGCTAGGCGAGCGGT    100
                     ||||||.|||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx     51 GGGAGCAGCGGATTATTGTTTGGGAAACAGATGGGGGCTAGGCGAGCGGT    100

BSNT_06055___    101 TTGCGGACGGCTTTAAGGCTATGGGGCCGCTGGCGCTGTCCATGATCGGA    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx    101 TTGCGGACGGCTTTAAGGCTATGGGGCCGCTGGCGCTGTCCATGATCGGA    150

BSNT_06055___    151 ATTGTGTCGCTGGCGCCCGTGCTGGCAGCAATCCTGATTCCCATTGTTGC    200
                     |||||.|||||||||||||||||||||||||||.||||||||||||||||
BSU39450___yx    151 ATTGTATCGCTGGCGCCCGTGCTGGCAGCAATCTTGATTCCCATTGTTGC    200

BSNT_06055___    201 TCCGTTTTACACAGCGATTGGCGCGGACCCTTCTTCCTTTGCGAACACCA    250
                     |||||||||||||||||||||||||||.||||||||||||||||||||||
BSU39450___yx    201 TCCGTTTTACACAGCGATTGGCGCGGATCCTTCTTCCTTTGCGAACACCA    250

BSNT_06055___    251 TTTTGGCGATTGATATGGGAGGATATGCGCTGGCTGGAGAAATGGCGAAA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx    251 TTTTGGCGATTGATATGGGAGGATATGCGCTGGCTGGAGAAATGGCGAAA    300

BSNT_06055___    301 GATCCGCAGGCCGGGCTGTTTTCATGGGTGTTTTTAGGAACAATGATGGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx    301 GATCCGCAGGCCGGGCTGTTTTCATGGGTGTTTTTAGGAACAATGATGGG    350

BSNT_06055___    351 ACCGGCAATCGTCTTCACGATTCCCGTCGCTCTTGGCATCATCGAAAAAG    400
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx    351 GCCGGCAATCGTCTTCACGATTCCCGTCGCTCTTGGCATCATCGAAAAAG    400

BSNT_06055___    401 AGGATCATCCGTATTTTGCGAAAGGCATATTAATCGGGCTGTGCACAGTG    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx    401 AGGATCATCCGTATTTTGCGAAAGGCATATTAATCGGGCTGTGCACAGTG    450

BSNT_06055___    451 CCAATCGGTTGTTTAATCGGCGGATTATGCGCAGGCTTTGACATCGGCAT    500
                     ||.||||||||.||||||||||||||||||||||||||||||||||||||
BSU39450___yx    451 CCGATCGGTTGCTTAATCGGCGGATTATGCGCAGGCTTTGACATCGGCAT    500

BSNT_06055___    501 GGTCGGTAAAAACCTTCTGATCCCGAGTCTGTTATCTGCTGTGATCGCTT    550
                     |.|.||||||||.|||||||||||||||||||||||||||||.|||||||
BSU39450___yx    501 GATAGGTAAAAATCTTCTGATCCCGAGTCTGTTATCTGCTGTCATCGCTT    550

BSNT_06055___    551 TTGGGTTATGGCGATACACCGACAGTATGATTCAGTTGTTTCATCTCTTC    600
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU39450___yx    551 TTGGGTTATGGCGATACACCGACAGAATGATTCAGTTGTTTCATCTCTTC    600

BSNT_06055___    601 GGGAAAGCGGTCAGTGTGGTTGCGACTATCGGGCTTGCAGCTGTTTCTGT    650
                     |||||||||||||||.|||||||||.||||||||||||||||||||||||
BSU39450___yx    601 GGGAAAGCGGTCAGTATGGTTGCGATTATCGGGCTTGCAGCTGTTTCTGT    650

BSNT_06055___    651 TGAAACGCTGACCGGTATTGTGCTGATTCCGGGAATGGAGAATGTCGAGA    700
                     |||||||.|||||||.||||||||||||||||||||||||||||||||||
BSU39450___yx    651 TGAAACGATGACCGGCATTGTGCTGATTCCGGGAATGGAGAATGTCGAGA    700

BSNT_06055___    701 CAGGGATACAAACGACAGGGACCATCGCCATTGCCCTGGCAGGGGCGTTT    750
                     ||||||||||||||||||||||||||||||||||.||||||||||||||.
BSU39450___yx    701 CAGGGATACAAACGACAGGGACCATCGCCATTGCTCTGGCAGGGGCGTTC    750

BSNT_06055___    751 CCAATGACTGCTTTTATCACAAAAACCTTTAAAAAACCGCTTCAGGCTCT    800
                     ||.|||||.||.|||||.||||||||||||||||||||||||||||||||
BSU39450___yx    751 CCGATGACGGCATTTATTACAAAAACCTTTAAAAAACCGCTTCAGGCTCT    800

BSNT_06055___    801 GGGGAAATGCTTTCATTTAGATGAGACAGCAACAGCAGGCTTGGTGACTT    850
                     ||||||||||.|||||||||||||||||||||||||||||||.|||||.|
BSU39450___yx    801 GGGGAAATGCCTTCATTTAGATGAGACAGCAACAGCAGGCTTAGTGACCT    850

BSNT_06055___    851 CTTTGGCGCACCATATCCCAATGCTGGCTTCATTAAAGAATATGACCCCG    900
                     ||||||||||.|||||||||||||||||||||||||||.|||||||.|||
BSU39450___yx    851 CTTTGGCGCATCATATCCCAATGCTGGCTTCATTAAAGGATATGACGCCG    900

BSNT_06055___    901 AGAGGAAAGGTCATCAATGTCGCGTTTGCGGTCAGCGGCGCCTTTGTACT    950
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx    901 AGAGGAAAGGTCATCAATGTCGCGTTTGCGGTCAGCGGCGCCTTTGTACT    950

BSNT_06055___    951 CGGCAGCCATCTCGGTTTTGTGGCTGGAATGAAAAAAGAAATGGCGGCGG   1000
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU39450___yx    951 CGGCAGCCATCTCGGTTTTGTAGCTGGAATGAAAAAAGAAATGGCGGCGG   1000

BSNT_06055___   1001 CCATGATCATTGGGAAATTAGCAGGAGGAGTCACAGCTGCCGCAGCGGCT   1050
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU39450___yx   1001 CCATGATCATTGGGAAATTAGCAGGCGGAGTCACAGCTGCCGCAGCGGCT   1050

BSNT_06055___   1051 GCTTGGATGACACCTGCACAATCAGCTAAACAGCAAAAACGTATCTCAGC   1100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39450___yx   1051 GCTTGGATGACACCTGCACAATCAGCTAAACAGCAAAAACGTATCTCAGC   1100

BSNT_06055___   1101 CGGCCATATCTGA   1113
                     |.||||||.||||
BSU39450___yx   1101 CAGCCATAGCTGA   1113


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