Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06104 and BSU39780

See Amino acid alignment / Visit BSNT_06104 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:40
# Commandline: needle
#    -asequence dna-align/BSNT_06104___iolS.1.22522.seq
#    -bsequence dna-align/BSU39780___iolS.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06104___iolS-BSU39780___iolS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06104___iolS-BSU39780___iolS.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06104___iolS
# 2: BSU39780___iolS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 933
# Identity:     912/933 (97.7%)
# Similarity:   912/933 (97.7%)
# Gaps:           0/933 ( 0.0%)
# Score: 4476.0
# 
#
#=======================================

BSNT_06104___      1 ATGAAAAAAGCGAAGCTCGGAAAATCAGACTTGCAGGTATTCCCTATCGG     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io      1 ATGAAAAAAGCGAAGCTCGGAAAATCAGACTTGCAGGTATTCCCTATCGG     50

BSNT_06104___     51 ATTAGGAACAAATGCTGTCGGAGGACATAACCTCTACCCGAACCTGAATG    100
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU39780___io     51 ATTAGGAACAAATGCTGTCGGAGGACATAACCTCTACCCGAACCTAAATG    100

BSNT_06104___    101 AAGAAACCGGAAAAGAATTGGTGCGCGAGGCGATTCATAATGGCGTGACC    150
                     ||||||||||||||||||||||||||||||||||.|.||||||||||||.
BSU39780___io    101 AAGAAACCGGAAAAGAATTGGTGCGCGAGGCGATCCGTAATGGCGTGACA    150

BSNT_06104___    151 ATGTTAGACACCGCTTATATTTACGGGATCGGCCGTTCCGAAGAATTAAT    200
                     |||||||||||||||||.||||||||||||||||||||||||||||||||
BSU39780___io    151 ATGTTAGACACCGCTTACATTTACGGGATCGGCCGTTCCGAAGAATTAAT    200

BSNT_06104___    201 TGGTGAAGTGCTGCGTGAATTCAACCGTGAAGATGTTGTCATCGCCACAA    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU39780___io    201 TGGTGAAGTGCTGCGTGAATTCAACCGTGAAGATGTTGTCATCGCGACAA    250

BSNT_06104___    251 AAGCCGCTCACAGAAAACAAGGCAATGACTTTGTCTTTGATAATTCACCA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io    251 AAGCCGCTCACAGAAAACAAGGCAATGACTTTGTCTTTGATAATTCACCA    300

BSNT_06104___    301 GAATTTCTAAAAAAATCAGTTGATGAAAGCCTAAAGCGCTTGAATACCGA    350
                     ||.|||||.|||||||||||||||||||||||.|||||||||||||||||
BSU39780___io    301 GATTTTCTTAAAAAATCAGTTGATGAAAGCCTGAAGCGCTTGAATACCGA    350

BSNT_06104___    351 TTATATTGATTTGTTCTACATTCACTTCCCTGACGAACATACGCCGAAGG    400
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU39780___io    351 TTATATTGATTTGTTCTACATTCACTTCCCTGACGAACATACGCCTAAGG    400

BSNT_06104___    401 ATGAAGCCGTTAACGCATTGAATGAGATGAAGAAAGCCGGAAAAATCCGC    450
                     ||||||||||||||||..|||||||||||||||||||||||||||||||.
BSU39780___io    401 ATGAAGCCGTTAACGCGCTGAATGAGATGAAGAAAGCCGGAAAAATCCGT    450

BSNT_06104___    451 TCCATCGGTGTATCCAACTTCTCTTTAGAGCAATTGAAAGAAGCAAACAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io    451 TCCATCGGTGTATCCAACTTCTCTTTAGAGCAATTGAAAGAAGCAAACAA    500

BSNT_06104___    501 AGACGGTTTGGTAGATGTATTGCAAGGCGAATACAACCTGTTAAACCGTG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io    501 AGACGGTTTGGTAGATGTATTGCAAGGCGAATACAACCTGTTAAACCGTG    550

BSNT_06104___    551 AAGCGGAAAAAACATTCTTCCCGTATACGAAGGAGCATAACATTTCATTT    600
                     ||||||||||||||||||||||||||||||||||||||||.|||||||||
BSU39780___io    551 AAGCGGAAAAAACATTCTTCCCGTATACGAAGGAGCATAATATTTCATTT    600

BSNT_06104___    601 ATCCCTTACTTCCCGCTCGTATCAGGTTTATTGGCAGGAAAGTATACAGA    650
                     ||||||||||||||.|||||||||||||||||||||||||||||||||||
BSU39780___io    601 ATCCCTTACTTCCCTCTCGTATCAGGTTTATTGGCAGGAAAGTATACAGA    650

BSNT_06104___    651 AGATACAACGTTCCCAGAAGGCGACCTGCGAAACGAACAGGAACACTTCA    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io    651 AGATACAACGTTCCCAGAAGGCGACCTGCGAAACGAACAGGAACACTTCA    700

BSNT_06104___    701 AGGGCGAGCGTTTCAAAGAAAATATCAGAAAGGTCAACAAGCTTGCGCCG    750
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io    701 AGGGTGAGCGTTTCAAAGAAAATATCAGAAAGGTCAACAAGCTTGCGCCG    750

BSNT_06104___    751 ATTGCCGAAAAACACAACGTGGATATCCCTCACATCGTATTGGCCTGGTA    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39780___io    751 ATTGCCGAAAAACACAACGTGGATATCCCTCACATCGTATTGGCCTGGTA    800

BSNT_06104___    801 TTTAGCAAGACCGGAAATTGATATTTTAATCCCTGGAGCAAAACGTGCCG    850
                     |||||||||||||||||||||||||||||||||.||||||||||||||||
BSU39780___io    801 TTTAGCAAGACCGGAAATTGATATTTTAATCCCAGGAGCAAAACGTGCCG    850

BSNT_06104___    851 ATCAGCTGATTGATAACATTAAAACAGCCGACGTGACGCTTTCTCAAGAA    900
                     |||||||||||||||||||.||||||||.||||||||||||||||||||.
BSU39780___io    851 ATCAGCTGATTGATAACATCAAAACAGCTGACGTGACGCTTTCTCAAGAG    900

BSNT_06104___    901 GATATTTCGTTTATTGATAAGCTGTTCGCATAA    933
                     ||||||||.||||||||||||||||||||||||
BSU39780___io    901 GATATTTCATTTATTGATAAGCTGTTCGCATAA    933


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