Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06118 and BSU39840

See Amino acid alignment / Visit BSNT_06118 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:41
# Commandline: needle
#    -asequence dna-align/BSNT_06118.1.22522.seq
#    -bsequence dna-align/BSU39840___yxbG.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06118-BSU39840___yxbG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06118-BSU39840___yxbG.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06118
# 2: BSU39840___yxbG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 822
# Identity:     601/822 (73.1%)
# Similarity:   601/822 (73.1%)
# Gaps:         189/822 (23.0%)
# Score: 2877.0
# 
#
#=======================================

BSNT_06118         0 --------------------------------------------------      0
                                                                       
BSU39840___yx      1 ATGGGAAGACTTGAAAACAAAACAGCAGTTATCACAGGCGCCGCGACAGG     50

BSNT_06118         0 --------------------------------------------------      0
                                                                       
BSU39840___yx     51 CATTGGTCAAGCGACGGCGGAGGTTTTTGCCAATGAAGGCGCGCGTGTGA    100

BSNT_06118         0 --------------------------------------------------      0
                                                                       
BSU39840___yx    101 TCATCGGAGATATCAATAAAGATCAAATGGAAGAAACAGTTGACGCAATC    150

BSNT_06118         1 ---------------------------------------GTGTCAGATGA     11
                                                            |||||||||||
BSU39840___yx    151 AGAAAAAACGGAGGACAGGCCGAATCCTTTCACCTCGATGTGTCAGATGA    200

BSNT_06118        12 AAACAGTGTGAAAGCTTTTGCTGACCAAATCAAGGATGCATGCGGAACGA     61
                     |||||||||||||||.||||||||.|||||||||||||||||||||||||
BSU39840___yx    201 AAACAGTGTGAAAGCATTTGCTGATCAAATCAAGGATGCATGCGGAACGA    250

BSNT_06118        62 TTGATATTCTGTTTAATAATGCCGGCGTTGATCAGGAGGGCGGAAAGGTG    111
                     |||||||||||||||||||||||||||||||||||||.||||||||||||
BSU39840___yx    251 TTGATATTCTGTTTAATAATGCCGGCGTTGATCAGGAAGGCGGAAAGGTG    300

BSNT_06118       112 CACGAATATCCGGTTGACCTGTTTGACCGCATTATCGCCGTCGACCTGCG    161
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU39840___yx    301 CACGAATATCCGGTTGACCTGTTTGACCGCATTATCGCCGTCGACCTGCG    350

BSNT_06118       162 CGGCACGTTCCTTTGCAGCAAATATCTGATTCCGCTCATGCTCGACAATG    211
                     ||||||.||||||||||||||||||.|||||||||||||||||||.||||
BSU39840___yx    351 CGGCACATTCCTTTGCAGCAAATATTTGATTCCGCTCATGCTCGAAAATG    400

BSNT_06118       212 GAGGTTCTATCATCAACACCTCCTCCATGTCAGGCCGCGCCGCGGATCTT    261
                     ||||.||.|||||||||||||||||||||||||||||.||||||||.|||
BSU39840___yx    401 GAGGCTCCATCATCAACACCTCCTCCATGTCAGGCCGTGCCGCGGACCTT    450

BSNT_06118       262 GACCGCTCCGGCTATAACGCGGCAAAAGGCGGTATCACCAACCTGACAAA    311
                     ||||||||||||||.|||||.|||||||||||||||||||||||||||||
BSU39840___yx    451 GACCGCTCCGGCTACAACGCCGCAAAAGGCGGTATCACCAACCTGACAAA    500

BSNT_06118       312 GGCAATGGCAATCGACTACGCACGGAACGGCATCCGCGTCAATTCCATTT    361
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU39840___yx    501 GGCAATGGCAATCGACTACGCACGAAACGGCATCCGCGTCAATTCCATTT    550

BSNT_06118       362 CACCAGGTACGATCGAAACCCCGCTGATTGACAAATTAGCAGGCACCAAA    411
                     ||||.||.|||||||||||.||||||||||||||||||||||||||.|||
BSU39840___yx    551 CACCGGGCACGATCGAAACACCGCTGATTGACAAATTAGCAGGCACAAAA    600

BSNT_06118       412 GAACAGGAAATGGGCGAAGCATTCCGCGAAGCCAACAAATGGGTCACGCC    461
                     ||||||||||||||||||..||||||||||||||||||||||.|||||||
BSU39840___yx    601 GAACAGGAAATGGGCGAACAATTCCGCGAAGCCAACAAATGGATCACGCC    650

BSNT_06118       462 GCTCGGCCGCCTTGGCCAGCCGAAGGAAATGGCGACAGTAGCGCTGTTCC    511
                     ||||||.||.|||||||||||.||.||||||||.|||||.||.|||||||
BSU39840___yx    651 GCTCGGACGTCTTGGCCAGCCCAAAGAAATGGCAACAGTGGCACTGTTCC    700

BSNT_06118       512 TCGCGTCAGACGACAGCTCATACGTCACAGGAGAGGACATCACCGCAGAC    561
                     ||||.|||||||||||||||||||||||||||||.|||||||||||||||
BSU39840___yx    701 TCGCATCAGACGACAGCTCATACGTCACAGGAGAAGACATCACCGCAGAC    750

BSNT_06118       562 GGCGGCATCATGGCATATACATGGCCTGGGAAGATGCTGATTGATGAGAA    611
                     ||||||||||||||.||.||||||||||||||||||||||||||.|||||
BSU39840___yx    751 GGCGGCATCATGGCGTACACATGGCCTGGGAAGATGCTGATTGAGGAGAA    800

BSNT_06118       612 ATGGAAGGAAGAAACGAAATAA    633
                     ||||||||||||||||||||||
BSU39840___yx    801 ATGGAAGGAAGAAACGAAATAA    822


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