Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06150 and BSU40130

See Amino acid alignment / Visit BSNT_06150 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:45
# Commandline: needle
#    -asequence dna-align/BSNT_06150___yydK.1.22522.seq
#    -bsequence dna-align/BSU40130___yydK.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06150___yydK-BSU40130___yydK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06150___yydK-BSU40130___yydK.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06150___yydK
# 2: BSU40130___yydK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 712
# Identity:     694/712 (97.5%)
# Similarity:   694/712 (97.5%)
# Gaps:           2/712 ( 0.3%)
# Score: 3396.0
# 
#
#=======================================

BSNT_06150___      1 ATGTTAAAATACCAGCAAATCGCAGCGGAAATTGAAACATATATAGAAGA     50
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU40130___yy      1 ATGTTAAAATACCAGCAAATCGCAACGGAAATTGAAACATATATAGAAGA     50

BSNT_06150___     51 ACACCAGCTTCAGCAGGGAGACAAACTGCCAGTCCTGGAAACCCTCATGG    100
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40130___yy     51 ACACCAGCTTCAGCAGGGAGACAAACTGCCAGTCCTAGAAACCCTCATGG    100

BSNT_06150___    101 CCCAGTTTGAAGTCAGCAAAAGCACAATTACAAAGTCCCTCGAGCTATTA    150
                     |||||||||||||||||||||||||.||.|||||||||||||||||||||
BSU40130___yy    101 CCCAGTTTGAAGTCAGCAAAAGCACCATCACAAAGTCCCTCGAGCTATTA    150

BSNT_06150___    151 GAGCAAAAAGGCGCGATCTTTCAAGTCAGAGGAAGCGGCATTTTCGTCAG    200
                     |||||||||||||||||||||||.||||||||||||||||||||||||||
BSU40130___yy    151 GAGCAAAAAGGCGCGATCTTTCAGGTCAGAGGAAGCGGCATTTTCGTCAG    200

BSNT_06150___    201 AAAACATAAACGAAAAGGCTATATCAGCCTTCTGTCGAATCAGGGGTTTA    250
                     |||||||||||||||||||||||||||||||||||||||||||||.||||
BSU40130___yy    201 AAAACATAAACGAAAAGGCTATATCAGCCTTCTGTCGAATCAGGGATTTA    250

BSNT_06150___    251 AAAAAGATCTCGAGGATTTCAACGTCACCTCAAAAGTCATCGAACTGGAC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy    251 AAAAAGATCTCGAGGATTTCAACGTCACCTCAAAAGTCATCGAACTGGAC    300

BSNT_06150___    301 GTGAGAAAGCCGACACCGGAAGCGGCGGAAAATCTGAACATCGAAATAAA    350
                     |||||||||||.||||||||||||||||||||.||||||||||.|||..|
BSU40130___yy    301 GTGAGAAAGCCAACACCGGAAGCGGCGGAAAACCTGAACATCGGAATGGA    350

BSNT_06150___    351 CGAAGACATCTACTATGTCAAAAGGGTCCGCTACATCAACGGCCAGACCC    400
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy    351 CGAGGACATCTACTATGTCAAAAGGGTCCGCTACATCAACGGCCAGACCC    400

BSNT_06150___    401 TTTGCTACGAAGAATCCTATTACAACAAATCCATCGTGACGTATTTAAAC    450
                     ||||||||||||||||||||||||.|||||||||||||||||||||||||
BSU40130___yy    401 TTTGCTACGAAGAATCCTATTACACCAAATCCATCGTGACGTATTTAAAC    450

BSNT_06150___    451 AACGAAATCGTTTCCCACTCCATCTTCCATTACATCCGGGAAGGACTGGG    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU40130___yy    451 AACGAAATCGTCTCCCACTCCATCTTCCATTACATCCGGGAAGGACTGGG    500

BSNT_06150___    501 GTTGAAGATTGGTTTTTCTGATTTGTTTCTGCACGTGGGCCAGCTTAATG    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy    501 GTTGAAGATTGGTTTTTCTGATTTGTTTCTGCACGTGGGCCAGCTTAATG    550

BSNT_06150___    551 AGGAAGAAGCGGAATATTTGGGATTAGAGGCTGGACTGCCGAAGCTGTAT    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy    551 AGGAAGAAGCGGAATATTTGGGATTAGAGGCTGGACTGCCGAAGCTGTAT    600

BSNT_06150___    601 ATAGAAAGTATTTTTCACCTGACAAATGGGCAGCCGTTTGATTACTCGAA    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40130___yy    601 ATAGAAAGTATTTTTCACCTGACAAATGGGCAGCCGTTTGATTACTCGAA    650

BSNT_06150___    651 GATTTCGTATAATTATGAGCAGTCGCAGTTTGTGGTGCAGGCTAATAGTT    700
                     ||||||||||||||||||||||||||||||||||||.|||||||||||||
BSU40130___yy    651 GATTTCGTATAATTATGAGCAGTCGCAGTTTGTGGTACAGGCTAATAGTT    700

BSNT_06150___    701 TTTTATTGTGA-    711
                     |||||||.| | 
BSU40130___yy    701 TTTTATTAT-AG    711


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