Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06151 and BSU40140

See Amino acid alignment / Visit BSNT_06151 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:45
# Commandline: needle
#    -asequence dna-align/BSNT_06151___yydJ.1.22522.seq
#    -bsequence dna-align/BSU40140___yydJ.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06151___yydJ-BSU40140___yydJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06151___yydJ-BSU40140___yydJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06151___yydJ
# 2: BSU40140___yydJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 723
# Identity:     716/723 (99.0%)
# Similarity:   716/723 (99.0%)
# Gaps:           0/723 ( 0.0%)
# Score: 3552.0
# 
#
#=======================================

BSNT_06151___      1 ATGAAATTAGAGTTTAAAAAGAGTATTAGCAACAAAGTTATCATTATTTT     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy      1 ATGAAATTAGAGTTTAAAAAGAGTATTAGCAACAAAGTTATCATTATTTT     50

BSNT_06151___     51 AGGAGCAATGTTTGTATTTTTATTTTTGCTGGGTTATTTTTTACTTGTTG    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy     51 AGGAGCAATGTTTGTATTTTTATTTTTGCTGGGTTATTTTTTACTTGTTG    100

BSNT_06151___    101 GAATTGATAAAGTCAGCAATGTTACACCTGAAATGTTTTTCTTTAGCTCC    150
                     ||||.|||||||||||.|||||||||||||||||||||||||||||||||
BSU40140___yy    101 GAATCGATAAAGTCAGTAATGTTACACCTGAAATGTTTTTCTTTAGCTCC    150

BSNT_06151___    151 TATACTGTTGCGACCCAGTTTGGTTTGATGTTATTTTCATTTGTTATAGC    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    151 TATACTGTTGCGACCCAGTTTGGTTTGATGTTATTTTCATTTGTTATAGC    200

BSNT_06151___    201 TTTCTTTATTAATAGAGAGTATTCAAACAAAAATATTCTCTTTTACAAGT    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    201 TTTCTTTATTAATAGAGAGTATTCAAACAAAAATATTCTCTTTTACAAGT    250

BSNT_06151___    251 TAATTGGAGAGAACATCTATACTTTCTTTTATAAAAAGATAGCTGTTTTA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    251 TAATTGGAGAGAACATCTATACTTTCTTTTATAAAAAGATAGCTGTTTTA    300

BSNT_06151___    301 TTTTTGGAATGTTTTGCATTTATAACGCTAGGCCTGCTAATCATATCGTT    350
                     |||||.||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    301 TTTTTAGAATGTTTTGCATTTATAACGCTAGGCCTGCTAATCATATCGTT    350

BSNT_06151___    351 GATGTACCATGATTTTTCGCATTTTGCATTATTACTTTTTTTATTTTCTG    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    351 GATGTACCATGATTTTTCGCATTTTGCATTATTACTTTTTTTATTTTCTG    400

BSNT_06151___    401 CAGTTATACTGCAGTATATTCTAATTATCGGAACTATAAGCATGTTATGT    450
                     |||||||||||||||||||||||||||||||||||||||||.||||||||
BSU40140___yy    401 CAGTTATACTGCAGTATATTCTAATTATCGGAACTATAAGCGTGTTATGT    450

BSNT_06151___    451 CCTAATATATTAATTAGTATAGGTGTCAGTATCGTTTATTGGATGACTTC    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    451 CCTAATATATTAATTAGTATAGGTGTCAGTATCGTTTATTGGATGACTTC    500

BSNT_06151___    501 TGTTATCTTAGTAGCTATAAGCAATAAAACGTTTGGTTTCATTGCTCCTT    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    501 TGTTATCTTAGTAGCTATAAGCAATAAAACGTTTGGTTTCATTGCTCCTT    550

BSNT_06151___    551 TTGAGGCAGGTAACACTATGTATCCCCGAATAGAAAGAGTGCTGCAATCT    600
                     ||||||||||||||||||||||.|||||||||||||||||||||||||||
BSU40140___yy    551 TTGAGGCAGGTAACACTATGTACCCCCGAATAGAAAGAGTGCTGCAATCT    600

BSNT_06151___    601 GATAACATGACACTTGGGAGTAATGATGTTTTATTTATTATTTTGTATTT    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40140___yy    601 GATAACATGACACTTGGGAGTAATGATGTTTTATTTATTATTTTGTATTT    650

BSNT_06151___    651 AGTTTCAATTATTATCATAAATGCGATTATCCTTCGCTTTTCTAAAACTA    700
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40140___yy    651 AGTTTCAATTATTATCATAAATGCGATTGTCCTTCGCTTTTCTAAAACTA    700

BSNT_06151___    701 GATGGATCAAAATGGGCATTTAA    723
                     |||||||||||||||||.|||||
BSU40140___yy    701 GATGGATCAAAATGGGCCTTTAA    723


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