Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06200 and BSU40410

See Amino acid alignment / Visit BSNT_06200 in genome browser / Return to Orthologue table
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:50
# Commandline: needle
#    -asequence dna-align/BSNT_06200___yycF.1.22522.seq
#    -bsequence dna-align/BSU40410___walR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06200___yycF-BSU40410___walR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06200___yycF-BSU40410___walR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06200___yycF
# 2: BSU40410___walR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 711
# Identity:     701/711 (98.6%)
# Similarity:   701/711 (98.6%)
# Gaps:           3/711 ( 0.4%)
# Score: 3477.0
# 
#
#=======================================

BSNT_06200___      1 ATGATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGA     50
                        |||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa      1 ---ATGGATAAAAAGATCCTTGTAGTAGATGATGAAAAACCGATTGCAGA     47

BSNT_06200___     51 TATATTGGAATTTAACTTAAGAAAAGAAGGCTATGAAGTGCACTGTGCCC    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa     48 TATATTGGAATTTAACTTAAGAAAAGAAGGCTATGAAGTGCACTGTGCCC     97

BSNT_06200___    101 ATGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTA    150
                     |.||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa     98 ACGACGGAAACGAAGCCGTTGAAATGGTAGAAGAGCTTCAGCCTGATTTA    147

BSNT_06200___    151 ATTCTTTTAGATATTATGCTCCCGAATAAAGACGGCGTTGAGGTATGCCG    200
                     |||||||||||||||||||||||.|||||||||||||||||.||||||||
BSU40410___wa    148 ATTCTTTTAGATATTATGCTCCCAAATAAAGACGGCGTTGAAGTATGCCG    197

BSNT_06200___    201 TGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACGGCTAAGG    250
                     .|||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    198 CGAAGTCAGAAAGAAATACGATATGCCAATCATTATGCTGACGGCTAAGG    247

BSNT_06200___    251 ATTCAGAAATTGACAAGGTTATCGGGCTCGAAATCGGTGCTGATGACTAT    300
                     ||||||||||||||||||||||||||||.|||||||||||||||||||||
BSU40410___wa    248 ATTCAGAAATTGACAAGGTTATCGGGCTTGAAATCGGTGCTGATGACTAT    297

BSNT_06200___    301 GTCACAAAACCATTCAGCACACGCGAGCTCTTGGCGCGTGTAAAAGCGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    298 GTCACAAAACCATTCAGCACACGCGAGCTCTTGGCGCGTGTAAAAGCGAA    347

BSNT_06200___    351 CCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    348 CCTGCGCCGCCAGCTGACAACAGCGCCTGCGGAGGAAGAGCCTTCCTCTA    397

BSNT_06200___    401 ACGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTA    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    398 ACGAGATTCATATCGGCTCTCTCGTCATCTTCCCTGACGCGTACGTTGTA    447

BSNT_06200___    451 TCAAAACGAGATGAAACAATCGAATTGACTCATCGTGAGTTCGAATTGCT    500
                     |||||||||||.||||||||||||||||||||||||||||||||||||||
BSU40410___wa    448 TCAAAACGAGACGAAACAATCGAATTGACTCATCGTGAGTTCGAATTGCT    497

BSNT_06200___    501 TCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACATTTGC    550
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    498 TCATTATTTAGCAAAACATATCGGACAAGTGATGACCCGTGAACATTTGC    547

BSNT_06200___    551 TTCAAACCGTTTGGGGCTATGATTACTTCGGCGATGTCAGAACGGTTGAC    600
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    548 TTCAAACCGTTTGGGGCTATGATTACTTCGGCGATGTCAGAACGGTTGAC    597

BSNT_06200___    601 GTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCGAGCCATCC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40410___wa    598 GTAACAGTCCGCCGGCTTCGTGAAAAAATCGAGGACAACCCGAGCCATCC    647

BSNT_06200___    651 AAATTGGATCGTCACACGCCGCGGTGTAGGTTATTACTTGAGAAACCCAG    700
                     |||||||||||||||||||||.||||||||||||||||||||||||||||
BSU40410___wa    648 AAATTGGATCGTCACACGCCGTGGTGTAGGTTATTACTTGAGAAACCCAG    697

BSNT_06200___    701 AACAGGACTAA    711
                     |||||||||||
BSU40410___wa    698 AACAGGACTAA    708


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