Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06231 and BSU40540

See Amino acid alignment / Visit BSNT_06231 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence dna-align/BSNT_06231___yybR.1.22522.seq
#    -bsequence dna-align/BSU40540___yybR.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06231___yybR-BSU40540___yybR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06231___yybR-BSU40540___yybR.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06231___yybR
# 2: BSU40540___yybR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 378
# Identity:     369/378 (97.6%)
# Similarity:   369/378 (97.6%)
# Gaps:           0/378 ( 0.0%)
# Score: 1809.0
# 
#
#=======================================

BSNT_06231___      1 ATGAGTGGAAAAAAGAATATATACCCGAACAAAGAAGGCTGTCCAGTTGA     50
                     |||||||.||||||||||||||||||||||||||||||||||||||||||
BSU40540___yy      1 ATGAGTGAAAAAAAGAATATATACCCGAACAAAGAAGGCTGTCCAGTTGA     50

BSNT_06231___     51 ATTTACTCTAGATGTCATTGGCGGAAAGTGGAAAGGAATTCTTTTTTATC    100
                     |||.||||||||||||||||||||||||||||||||||||||||||||||
BSU40540___yy     51 ATTCACTCTAGATGTCATTGGCGGAAAGTGGAAAGGAATTCTTTTTTATC    100

BSNT_06231___    101 ACATGATAGATGGCAAGAAACGATTTAATGAGTTTCGGCGAATCTGCCCG    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40540___yy    101 ACATGATAGATGGCAAGAAACGATTTAATGAGTTTCGGCGAATCTGCCCG    150

BSNT_06231___    151 AGTATTACTCAAAGAATGCTTACTCTTCAGCTGAGGGAGCTGGAAGCGGA    200
                     ||||||||||||||||||||||||||.|||||||||||||||||||||||
BSU40540___yy    151 AGTATTACTCAAAGAATGCTTACTCTCCAGCTGAGGGAGCTGGAAGCGGA    200

BSNT_06231___    201 CGGCATCGTGCATCGTGAGGTTTATCAACAGGTGCCGCCCAAGGTTGAGT    250
                     ||||||||||||.||||||||||||||.|||||||||||||||||.||||
BSU40540___yy    201 CGGCATCGTGCACCGTGAGGTTTATCACCAGGTGCCGCCCAAGGTAGAGT    250

BSNT_06231___    251 ACTCTCTGACGGAATTCGGGCGAACGCTTGAACCGATTGTTTTGCAAATG    300
                     ||||||||||||||||.|||||.|||||||||||||||||||||||||||
BSU40540___yy    251 ACTCTCTGACGGAATTTGGGCGCACGCTTGAACCGATTGTTTTGCAAATG    300

BSNT_06231___    301 AAAGAATGGGGAGAATCCAACAGAGACGTGCTGGAATCTTATCGTTCGAA    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40540___yy    301 AAAGAATGGGGAGAATCCAACAGAGACGTGCTGGAATCTTATCGTTCGAA    350

BSNT_06231___    351 CGGCTTACTGAAGGATCAGCAGAAATAG    378
                     |||||||.||||||||||||||||||||
BSU40540___yy    351 CGGCTTAGTGAAGGATCAGCAGAAATAG    378


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