Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06232 and BSU40550

See Amino acid alignment / Visit BSNT_06232 in genome browser / Return to Orthologue table 
########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:53
# Commandline: needle
#    -asequence dna-align/BSNT_06232___ppaC.1.22522.seq
#    -bsequence dna-align/BSU40550___ppaC.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06232___ppaC-BSU40550___ppaC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06232___ppaC-BSU40550___ppaC.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06232___ppaC
# 2: BSU40550___ppaC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 930
# Identity:     926/930 (99.6%)
# Similarity:   926/930 (99.6%)
# Gaps:           0/930 ( 0.0%)
# Score: 4614.0
# 
#
#=======================================

BSNT_06232___      1 ATGGAAAAGATACTTATTTTCGGACACCAAAACCCAGACACAGATACGAT     50
                     ||||||||||||||||||||||||||||||||||||||.|||||||||||
BSU40550___pp      1 ATGGAAAAGATACTTATTTTCGGACACCAAAACCCAGATACAGATACGAT     50

BSNT_06232___     51 TTGTTCTGCGATCGCTTATGCTGATTTGAAAAACAAACTCGGCTTCAATG    100
                     ||||||||||||.|||||||||||||||||||||||||||||||||||||
BSU40550___pp     51 TTGTTCTGCGATTGCTTATGCTGATTTGAAAAACAAACTCGGCTTCAATG    100

BSNT_06232___    101 CTGAGCCTGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCTT    150
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    101 CTGAGCCTGTCCGCCTCGGACAAGTCAACGGCGAAACACAATACGCGCTT    150

BSNT_06232___    151 GACTATTTCAAACAAGAAAGCCCGCGTCTTGTTGAAACAGCTGCAAACGA    200
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    151 GACTATTTCAAACAAGAAAGCCCGCGTCTTGTTGAAACAGCTGCAAACGA    200

BSNT_06232___    201 AGTAAACGGCGTTATCCTGGTTGACCATAACGAACGCCAGCAAAGCATCA    250
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    201 AGTAAACGGCGTTATCCTGGTTGACCATAACGAACGCCAGCAAAGCATCA    250

BSNT_06232___    251 AAGACATTGAAGAGGTTCAGGTTTTAGAGGTTATCGACCATCACCGCATC    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    251 AAGACATTGAAGAGGTTCAGGTTTTAGAGGTTATCGACCATCACCGCATC    300

BSNT_06232___    301 GCTAACTTTGAAACAGCTGAGCCGCTTTACTATCGTGCTGAGCCTGTAGG    350
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    301 GCTAACTTTGAAACAGCTGAGCCGCTTTACTATCGTGCTGAGCCTGTAGG    350

BSNT_06232___    351 CTGTACGGCTACCATCTTAAACAAAATGTACAAAGAGAATAACGTGAAAA    400
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    351 CTGTACGGCTACCATCTTAAACAAAATGTACAAAGAGAATAACGTGAAAA    400

BSNT_06232___    401 TCGAGAAAGAAATTGCCGGCCTTATGCTGTCTGCGATCATTTCTGATTCC    450
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    401 TCGAGAAAGAAATTGCCGGCCTTATGCTGTCTGCGATCATTTCTGATTCC    450

BSNT_06232___    451 CTGTTATTTAAATCTCCAACTTGCACGGACCAAGACGTAGCAGCAGCAAA    500
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    451 CTGTTATTTAAATCTCCAACTTGCACGGACCAAGACGTAGCAGCAGCAAA    500

BSNT_06232___    501 AGAGCTTGCGGAGATCGCTGGAGTAAATGCTGAAGAATACGGCTTGAACA    550
                     |||||||||||||||||||||||||.||||||||||||||||||||||||
BSU40550___pp    501 AGAGCTTGCGGAGATCGCTGGAGTAGATGCTGAAGAATACGGCTTGAACA    550

BSNT_06232___    551 TGCTGAAAGCAGGCGCTGATCTAAGCAAAAAAACAGTGGAAGAGCTCATT    600
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    551 TGTTGAAAGCAGGCGCTGATCTAAGCAAAAAAACAGTGGAAGAGCTCATT    600

BSNT_06232___    601 TCTCTTGATGCGAAAGAATTTACACTCGGCAGCAAGAAAGTCGAAATCGC    650
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    601 TCTCTTGATGCGAAAGAATTTACACTCGGCAGCAAGAAAGTCGAAATCGC    650

BSNT_06232___    651 ACAAGTAAACACAGTGGACATTGAAGATGTAAAAAAACGCCAAGCTGAAT    700
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    651 ACAAGTAAACACAGTGGACATTGAAGATGTAAAAAAACGCCAAGCTGAAT    700

BSNT_06232___    701 TAGAAGCTGTGATCTCAAAAGTTGTGGCTGAGAAGAATCTTGATCTGTTC    750
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    701 TAGAAGCTGTGATCTCAAAAGTTGTGGCTGAGAAGAATCTTGATCTGTTC    750

BSNT_06232___    751 CTTCTCGTTATCACAGATATCTTAGAAAATGATTCACTTGCTCTTGCAAT    800
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    751 CTTCTCGTTATCACAGATATCTTAGAAAATGATTCACTTGCTCTTGCAAT    800

BSNT_06232___    801 CGGTAACGAAGCAGCGAAAGTGGAAAAAGCGTTCAACGTTACATTAGAAA    850
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    801 CGGTAACGAAGCAGCGAAAGTGGAAAAAGCGTTCAACGTTACATTAGAAA    850

BSNT_06232___    851 ACAACACAGCCCTCTTAAAAGGCGTTGTTTCCCGTAAAAAACAAGTCGTT    900
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40550___pp    851 ACAACACAGCCCTCTTAAAAGGCGTTGTTTCCCGTAAAAAACAAGTCGTT    900

BSNT_06232___    901 CCTGTCTTAACAGACGCAATGGCTGAATAA    930
                     ||||||||||||||||||||||||||||||
BSU40550___pp    901 CCTGTCTTAACAGACGCAATGGCTGAATAA    930


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