Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_06241 and BSU40640

See Amino acid alignment / Visit BSNT_06241 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:27:54
# Commandline: needle
#    -asequence dna-align/BSNT_06241___yybH.1.22522.seq
#    -bsequence dna-align/BSU40640___yybH.2.22522.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_06241___yybH-BSU40640___yybH.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06241___yybH-BSU40640___yybH.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06241___yybH
# 2: BSU40640___yybH
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 390
# Identity:     379/390 (97.2%)
# Similarity:   379/390 (97.2%)
# Gaps:           0/390 ( 0.0%)
# Score: 1851.0
# 
#
#=======================================

BSNT_06241___      1 TTGGAACAGCAATTGAAAGACATCATCTCTGCGTGTGATTTGGCAATCCA     50
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40640___yy      1 TTGGAACAGCAATTGAAAGACATCATCTCTGCGTGTGATTTGGCAATCCA     50

BSNT_06241___     51 AAATGAAGATTTTGATACACTGATGAATTATTATTCGGAAGATGCCGTTT    100
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40640___yy     51 AAATGAAGATTTTGATACACTGATGAATTATTATTCGGAAGATGCCGTTT    100

BSNT_06241___    101 TAGTCGTGAAGCCCGGCATGATCGCGCGAGGCAAAGAAGAAATCAAAAAA    150
                     ||||.||||||||.||||||||||||||||||||.|||||||||||||||
BSU40640___yy    101 TAGTTGTGAAGCCGGGCATGATCGCGCGAGGCAAGGAAGAAATCAAAAAA    150

BSNT_06241___    151 GCGTTTATCACGATTGCGAACGATTTCAATCATCATATTGTGCCGAGACA    200
                     |||||||||||||||||||||.|||||||||||||||||||.||||.|||
BSU40640___yy    151 GCGTTTATCACGATTGCGAACTATTTCAATCATCATATTGTCCCGACACA    200

BSNT_06241___    201 AGGGGAAATGATCCTGTTGGAAGCAGGTGACACGGTACTCGTCCTTTCTC    250
                     ||||.|||||||||||||||||||||||||||||||||||||.|||||||
BSU40640___yy    201 AGGGAAAATGATCCTGTTGGAAGCAGGTGACACGGTACTCGTTCTTTCTC    250

BSNT_06241___    251 AGACACTGCTTGATTCGGATAAAAAGGACTCCGAGTATGCGATGGAAAGA    300
                     ||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40640___yy    251 AGACACTGCTTGATTCGGATAAAAAGGACTCCGAGTATGCGATGGAAAGA    300

BSNT_06241___    301 AGGGCGACCTATGTATTTAAGAAGAATGCGCAAGGCGAGTGGCTTTGTGT    350
                     ||||||||||||||||||||.|||||||||||||||||||||||||||||
BSU40640___yy    301 AGGGCGACCTATGTATTTAAAAAGAATGCGCAAGGCGAGTGGCTTTGTGT    350

BSNT_06241___    351 AATCGATAACTCATATGGTACGGATTTAATTGGTGTGTAA    390
                     |||.|||||.||||||||||||||||||||||||||||||
BSU40640___yy    351 AATTGATAATTCATATGGTACGGATTTAATTGGTGTGTAA    390


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