Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_03836 and BSU40670
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:22:56
# Commandline: needle
# -asequence dna-align/BSNT_03836.1.22522.seq
# -bsequence dna-align/BSU40670___yybE.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_03836-BSU40670___yybE.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_03836-BSU40670___yybE.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_03836
# 2: BSU40670___yybE
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 919
# Identity: 618/919 (67.2%)
# Similarity: 618/919 (67.2%)
# Gaps: 68/919 ( 7.4%)
# Score: 1892.0
#
#
#=======================================
BSNT_03836 1 ATGGAATGGGAACAATTAGAGTACTTTCAAACTCTTGCTCGTATACAGCA 50
.||||||||||||||.|.||.||.||||||||.||.||.||.||.|||||
BSU40670___yy 1 TTGGAATGGGAACAACTTGAATATTTTCAAACACTGGCCCGGATGCAGCA 50
BSNT_03836 51 TGTAACCAAAGCTGCTGAAACGTTATCAATAACACAGCCAGCACTTTCTC 100
.||.||.|||||.||..|||...|.||.||.||||||||.||||||||.|
BSU40670___yy 51 CGTCACGAAAGCCGCAAAAAGCCTCTCCATCACACAGCCTGCACTTTCAC 100
BSNT_03836 101 GGTCTATTGTTAGATTAGAAAATCACTTAGGTGTTCCGCTTTTTGATAGA 150
|.|||||.|..||..|.||||||||.||.||.||.|||||.|||||.||.
BSU40670___yy 101 GCTCTATCGCCAGGCTGGAAAATCATTTGGGCGTCCCGCTATTTGACAGG 150
BSNT_03836 151 CAAGGCCGGTCCATTAAATTAAATAAATATGGGGAAATATTCCTCAAGA- 199
|||||.||.|||||.|..||||||.||||.||..|.|| ||..|.|.||
BSU40670___yy 151 CAAGGACGATCCATCAGCTTAAATCAATACGGACACAT-TTTTTTACGAC 199
BSNT_03836 200 GGGTTGATTCCATGATTCGA--GAATATACAGAAGGAAAGGAAGAAATTC 247
|||||.|..|.||||| || ||.|||||.||||||||.||||||||.|
BSU40670___yy 200 GGGTTCAGGCGATGAT--GAAGGAGTATACCGAAGGAAAAGAAGAAATCC 247
BSNT_03836 248 AATCTCTT-TTAAAACCGGATCAAGGTGAAGTGTCTTTAGGCTTTTTACA 296
||.| ||| |||||.||.||.|||||.|.|||.|||.|.||.||||||||
BSU40670___yy 248 AAGC-CTTATTAAAGCCAGACCAAGGCGTAGTCTCTCTCGGTTTTTTACA 296
BSNT_03836 297 CACCCTGGGTACAACAATAGTTCCAAATTTAATTGGAACGTTTAA--AGA 344
.||..|.||.||.||..|.||.||..||.|.||.||..|.|||.| ||
BSU40670___yy 297 TACATTAGGCACCACGCTCGTGCCCGATCTCATCGGCTCCTTTCAGCAG- 345
BSNT_03836 345 TAATTACCCAAAAGTTCAATTTCAACTAAACCAGTCTCACTCTAATT--- 391
.|||..|||||.|.||| .||.||.||.||.||....||||||.|||
BSU40670___yy 346 GAATACCCCAACATTTC-CTTCCAGCTGAAGCAAAACCACTCTTATTGGC 394
BSNT_03836 392 TGCTTTTA-GATAAACTAAAATCAGGTGAGCTTGATCTCTGCCTACTTGC 440
|||||..| ||| |||||||.||.||.||.||.|||||.||.||.||
BSU40670___yy 395 TGCTTGAACGAT----TAAAATCCGGAGATCTGGACCTCTGTCTCCTCGC 440
BSNT_03836 441 TTCTTTT---CC----AGTCGAATCAAATATAATGTGGA--AACCCTTAT 481
|||..|| || |.||..|||.|| |||| ||.| |.|
BSU40670___yy 441 TTCGATTAAGCCTGAAAATCCGATCCAA-------TGGATCAAGC--TGT 481
BSNT_03836 482 GGAAGGAGGAGCTTTTTTTATTTTTGCCAAAAAAACATGTGTTAGCTACT 531
|||..||.||.||.|||.|||||.|||||||..|.||....|||||.|.|
BSU40670___yy 482 GGAGTGAAGAACTCTTTGTATTTGTGCCAAATGATCACCCATTAGCCAGT 531
BSNT_03836 532 CGTGAGGATATTACGTTAAACGAAATAGCTAATGAGCCTTTTGTTTTAAT 581
||.||....|||||..|.||.||.||.||....||||.||||.|||||.|
BSU40670___yy 532 CGCGAAAGCATTACCCTGAATGAGATTGCCGGGGAGCGTTTTATTTTATT 581
BSNT_03836 582 GAAAGAAGGTTTCGCCCTTCGAGTGACAATAGATGATATTTTTGAGCAAG 631
||||.|.||.|..||.|||||..||||..|.|||||..|.||||||.|.|
BSU40670___yy 582 GAAAAAGGGCTATGCGCTTCGGATGACGGTCGATGAGCTGTTTGAGAAGG 631
BSNT_03836 632 TTAATATTAC-CCCAAACATTGTATTTGAAGGTGAAGAAGCTACAACAAT 680
..|||| ||| .||.||||||.|.||||||||.||||||||.||.||...
BSU40670___yy 632 CCAATA-TACAGCCGAACATTATGTTTGAAGGAGAAGAAGCAACTACTGC 680
BSNT_03836 681 CGCAGGTTTTGTTGCAGCGGGTCTTGGTGTTTCAATTCTCCCTGATTTTA 730
||||||||||||.|||||.|||||.||..|.||.||||||||.||..|.|
BSU40670___yy 681 CGCAGGTTTTGTGGCAGCCGGTCTGGGCATATCTATTCTCCCAGACCTGA 730
BSNT_03836 731 AAGGCTTAGACCAAACGAATATCGCAAAGGTTCGGATTAGTTGGCCAAGG 780
|||||||||||||||..||.|||.|.||..|.||..|.||.||||| ||
BSU40670___yy 731 AAGGCTTAGACCAAAGCAAAATCACCAAAATCCGCGTCAGCTGGCC--GG 778
BSNT_03836 781 --TTTGAGCGT---ACAG---TTGGCCTCTCTTGGATTAAAGGGAAGCAC 822
|.|.||||| |.|| ||| |.|||||.|||||.|.|...
BSU40670___yy 779 AATGTCAGCGTGTCATAGGAATTG------CCTGGATAAAAGGCAGGTTT 822
BSNT_03836 823 CTATCACCTGTCACTGAAAACTTCAAGCAATATATCATCAATCAGTTTCC 872
.|||||||.||..||||.|.|||.||.||||||.|.||||..||.|||.|
BSU40670___yy 823 TTATCACCGGTTGCTGAGACCTTTAAACAATATGTGATCAGCCATTTTTC 872
BSNT_03836 873 TCAAATAGATTCGATATAG 891
| .|.|||
BSU40670___yy 873 T-GAGTAG----------- 879
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