Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06248 and BSU40730
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:55
# Commandline: needle
# -asequence dna-align/BSNT_06248___yyaS.1.22522.seq
# -bsequence dna-align/BSU40730___yyaS.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06248___yyaS-BSU40730___yyaS.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06248___yyaS-BSU40730___yyaS.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06248___yyaS
# 2: BSU40730___yyaS
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 606
# Identity: 570/606 (94.1%)
# Similarity: 570/606 (94.1%)
# Gaps: 3/606 ( 0.5%)
# Score: 2718.0
#
#
#=======================================
BSNT_06248___ 1 ATGAAATATATTTTTTACGGATTAGGCATACTCATATTAAGTTTGGGCAT 50
|||||||||||.|.|||||||.||||||||||||||||||||||||||||
BSU40730___yy 1 ATGAAATATATGTATTACGGAATAGGCATACTCATATTAAGTTTGGGCAT 50
BSNT_06248___ 51 TTCCTTAACCATACAATCAGGACTGGGCACATCACCCTTCGATGCCCTTT 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40730___yy 51 TTCCTTAACCATACAATCAGGACTGGGCACATCACCCTTCGATGCCCTTT 100
BSNT_06248___ 101 TGGTTGGTCTGTCAAAAGAAATCGGTCTTACCGTAGGGAGCTGGGAGGTC 150
|||||||||||||||||.|||||||||||||||||||.||||||||||||
BSU40730___yy 101 TGGTTGGTCTGTCAAAAAAAATCGGTCTTACCGTAGGAAGCTGGGAGGTC 150
BSNT_06248___ 151 CTTATTTCTGTGATCCTCTTAATCTGCAACGCTATATTAACGAGAAAAAA 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU40730___yy 151 CTTATTTCTGTGATCCTCTTAATCTGCAACGCTATATTAACGAGAAAAAA 200
BSNT_06248___ 201 ACCTATTTTGCTAGGCTTAATTACAGCATTCATTACTGGAATAGGCATTG 250
||||||||||||.|||||.|||||||||||||||||||||||||||||||
BSU40730___yy 201 ACCTATTTTGCTGGGCTTGATTACAGCATTCATTACTGGAATAGGCATTG 250
BSNT_06248___ 251 ACCTATGGTTGTTTGTTGTAAAAAACACCCTCTATCTAAACGCGTTGTTA 300
|||||||||||||||||||||||||||||.|||||||||||.||||||||
BSU40730___yy 251 ACCTATGGTTGTTTGTTGTAAAAAACACCATCTATCTAAACTCGTTGTTA 300
BSNT_06248___ 301 AGCAAACTGCTTTGTTTCGGAATTGGTTTGGTGCTCATCGGTCTTGGAAC 350
|||||||||.|||||||.||||||||||||||||||||||||||||||||
BSU40730___yy 301 AGCAAACTGATTTGTTTTGGAATTGGTTTGGTGCTCATCGGTCTTGGAAC 350
BSNT_06248___ 351 AGCCATCTATCTTCAGACGAAATTCGCATCAACGCCCATCGATCATTTAA 400
|||||||||||||||||||||||||||||||||.||.|||||||||||||
BSU40730___yy 351 AGCCATCTATCTTCAGACGAAATTCGCATCAACACCGATCGATCATTTAA 400
BSNT_06248___ 401 CACTTATTATCCGAGATCTCTCCAAAAGAACAATCTTGTTTTCAAGAACA 450
||||||||||||||||||||||||||||||||||.|||||||||||.|||
BSU40730___yy 401 CACTTATTATCCGAGATCTCTCCAAAAGAACAATATTGTTTTCAAGGACA 450
BSNT_06248___ 451 TTGGTATATGCTCTTTTCTTAGTATTAGCAATTGTCTTTAGAGGTCCTAT 500
||||||||.||||||||||||||||||||.||..||||||.|||.|||||
BSU40730___yy 451 TTGGTATACGCTCTTTTCTTAGTATTAGCCATCATCTTTAAAGGCCCTAT 500
BSNT_06248___ 501 CGGCATTGGAACCCTTTTAACCGTCTGTTTAGGAGGAATGATCCTTCACG 550
||||||.|||||.||||||||.||.|||||.|||||||||.|||||||||
BSU40730___yy 501 CGGCATCGGAACTCTTTTAACGGTTTGTTTGGGAGGAATGCTCCTTCACG 550
BSNT_06248___ 551 TTTTTATGCCTATTGTGGAAAGACACCTCTTATCAAAAAAAAGAAGGGGT 600
|||||||||||||||||||||||||..||||||||||.||.|||||.|||
BSU40730___yy 551 TTTTTATGCCTATTGTGGAAAGACATTTCTTATCAAAGAATAGAAGAGGT 600
BSNT_06248___ 601 TAA--- 603
||.
BSU40730___yy 601 TATTAA 606
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