Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_06292 and BSU41050
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:27:59
# Commandline: needle
# -asequence dna-align/BSNT_06292___rnpA.1.22522.seq
# -bsequence dna-align/BSU41050___rnpA.2.22522.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_06292___rnpA-BSU41050___rnpA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_06292___rnpA-BSU41050___rnpA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_06292___rnpA
# 2: BSU41050___rnpA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 351
# Identity: 349/351 (99.4%)
# Similarity: 349/351 (99.4%)
# Gaps: 0/351 ( 0.0%)
# Score: 1737.0
#
#
#=======================================
BSNT_06292___ 1 TTGAAGAAGCGAAATCGTTTAAAGAAAAATGAAGATTTTCAAAAAGTGTT 50
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41050___rn 1 TTGAAGAAGCGAAATCGTTTAAAGAAAAATGAAGATTTTCAAAAAGTGTT 50
BSNT_06292___ 51 TAAACATGGGACATCAGTTGCAAACCGCCAGTTTGTCTTATATACGCTTG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41050___rn 51 TAAACATGGGACATCAGTTGCAAACCGCCAGTTTGTCTTATATACGCTTG 100
BSNT_06292___ 101 ATCAGCCTGAAAATGATGAACTGCGTGTCGGGCTTTCCGTCAGCAAAAAA 150
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41050___rn 101 ATCAGCCTGAAAATGATGAACTGCGTGTCGGGCTTTCCGTCAGCAAAAAA 150
BSNT_06292___ 151 ATTGGCAATGCTGTGATGCGAAATCGGATCAAACGTTTGATTCGGCAGGC 200
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41050___rn 151 ATTGGCAATGCTGTGATGCGAAATCGGATCAAACGTTTGATTCGGCAGGC 200
BSNT_06292___ 201 CTTTCTTGAAGAGAAAGAGAGACTGAAGGAAAAGGATTACATCATTATTG 250
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41050___rn 201 CTTTCTTGAAGAGAAAGAGAGACTGAAGGAAAAGGATTACATCATTATTG 250
BSNT_06292___ 251 CCAGAAAACCGGCGAGCCAGCTGACATTTGAGGAAACGAAAAAAAGTTTG 300
|||||||||||||||||||||||||||.|||||||||||||||||||.||
BSU41050___rn 251 CCAGAAAACCGGCGAGCCAGCTGACATATGAGGAAACGAAAAAAAGTCTG 300
BSNT_06292___ 301 CAGCATCTATTCAGAAAGTCTTCATTATATAAGAAATCTTCGTCAAAGTA 350
||||||||||||||||||||||||||||||||||||||||||||||||||
BSU41050___rn 301 CAGCATCTATTCAGAAAGTCTTCATTATATAAGAAATCTTCGTCAAAGTA 350
BSNT_06292___ 351 G 351
|
BSU41050___rn 351 G 351
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