Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00025 and RBAM_000150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:47
# Commandline: needle
# -asequence dna-align/BSNT_00025___yaaE.1.9828.seq
# -bsequence dna-align/RBAM_000150___pdxT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00025___yaaE-RBAM_000150___pdxT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00025___yaaE-RBAM_000150___pdxT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00025___yaaE
# 2: RBAM_000150___pdxT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 594
# Identity: 467/594 (78.6%)
# Similarity: 467/594 (78.6%)
# Gaps: 6/594 ( 1.0%)
# Score: 1810.0
#
#
#=======================================
BSNT_00025___ 1 ATGTTAACAATAGGTGTACTAGGACTTCAAGGAGCAGTTAGAGAGCACAT 50
|||||||||||.||||||||.|||||||||||||||||.|||||.||.||
RBAM_000150__ 1 ATGTTAACAATTGGTGTACTTGGACTTCAAGGAGCAGTAAGAGAACATAT 50
BSNT_00025___ 51 CCATGCGATTGAAGCATGCGGCGCGGCTGGTCTTGTCGTAAAACGTCCGG 100
.|.|.|.|||||||||||.||..|....|||.|.|||.|.||.|||||.|
RBAM_000150__ 51 TCGTTCAATTGAAGCATGTGGTTCAAAAGGTGTCGTCATTAAGCGTCCTG 100
BSNT_00025___ 101 AGCAGCTGAACGAAGTTGACGGGTTGATTTTGCCGGGCGGTGAGAGCACG 150
|.||||||.|.||..|.|||||.||.||..||||||||||.||.||||||
RBAM_000150__ 101 AACAGCTGGATGACATCGACGGCTTAATCCTGCCGGGCGGGGAAAGCACG 150
BSNT_00025___ 151 ACGATGCGCCGTTTGATCGATACGTATCAATTCATGGAGCCGCTTCGTGA 200
||||||||.|||||.||.|||||||||||.||.||||||||||||||.||
RBAM_000150__ 151 ACGATGCGGCGTTTAATGGATACGTATCATTTTATGGAGCCGCTTCGCGA 200
BSNT_00025___ 201 ATTCGCTGCTCAGGGCAAACCGATGTTTGGAACATGTGCCGGATTAATTA 250
.||.||.||.||.|||||.||||||||.||.|||||.|||||..|.||||
RBAM_000150__ 201 GTTTGCCGCCCAAGGCAAGCCGATGTTCGGCACATGCGCCGGTCTGATTA 250
BSNT_00025___ 251 TATTAGCAAAAGAAATTGCCGGTTCAGATAATCCTCATTTAGGTCTTCTG 300
|.|||||.|||||.||.||.||..|.|||||..||||||||||.||..||
RBAM_000150__ 251 TTTTAGCCAAAGAGATAGCGGGAACGGATAACGCTCATTTAGGGCTGTTG 300
BSNT_00025___ 301 AATGTGGTTGTAGAACGTAATTCATTTGGCCGGCAGGTTGACAGCTTTGA 350
||.||.||.||.||.||||||||.|||||.||.|||||.|||||||||||
RBAM_000150__ 301 AACGTTGTCGTCGAGCGTAATTCCTTTGGACGTCAGGTCGACAGCTTTGA 350
BSNT_00025___ 351 AGCTGATTTAACAATTAAAGGCTTGGACGAGCCTTTTACTGGGGTATTCA 400
|||||||.|.||.|||||||||.|.||.|||||.|||||.||.|||||.|
RBAM_000150__ 351 AGCTGATCTGACGATTAAAGGCCTTGATGAGCCGTTTACGGGTGTATTTA 400
BSNT_00025___ 401 TCCGTGCTCCGCATATTTTAGAAGCTGGTGAAAATGTTGAAGTTCTATCG 450
|.||.||.|||||||||||||||||.||.|||.||||||||||.||.|..
RBAM_000150__ 401 TTCGCGCGCCGCATATTTTAGAAGCCGGAGAAGATGTTGAAGTGCTTTGT 450
BSNT_00025___ 451 GAGCATAATGGTCGTATTGTAGCCGCGAAACAGGGGCAATTCCTTGGCTG 500
||||||||.||.||.||.||.||.||.||.||||||.|.|||||.|||||
RBAM_000150__ 451 GAGCATAACGGACGCATCGTGGCTGCAAAGCAGGGGAATTTCCTCGGCTG 500
BSNT_00025___ 501 CTCATTCCATCCGGAGCTGACAGAAGATCACCGAGTGACGCAGCTGTTTG 550
|||.||||||||.||.|||||.||.||||||||.|||||..|||||||||
RBAM_000150__ 501 CTCGTTCCATCCTGAACTGACGGATGATCACCGGGTGACAGAGCTGTTTG 550
BSNT_00025___ 551 TTGAA-ATGGTTGAGGAATATAAGCA--AAAGGCACTTGTATAA 591
|||| ||||..||..|..||||||| ||| ||..|||||||
RBAM_000150__ 551 -TGAAGATGGCGGAAAAGCATAAGCAGGAAA--CAGCTGTATAA 591
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