Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00041 and RBAM_000270
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:48
# Commandline: needle
# -asequence dna-align/BSNT_00041___recR.1.9828.seq
# -bsequence dna-align/RBAM_000270___recR.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00041___recR-RBAM_000270___recR.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00041___recR-RBAM_000270___recR.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00041___recR
# 2: RBAM_000270___recR
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 597
# Identity: 528/597 (88.4%)
# Similarity: 528/597 (88.4%)
# Gaps: 0/597 ( 0.0%)
# Score: 2364.0
#
#
#=======================================
BSNT_00041___ 1 ATGCAATATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATT 50
|||||.||||||||||||||||||||||||||||||||||||||||||||
RBAM_000270__ 1 ATGCAGTATCCTGAACCAATATCAAAGCTGATTGACAGCTTTATGAAATT 50
BSNT_00041___ 51 GCCAGGGATCGGACCGAAAACAGCGGTTCGTCTGGCTTTTTTTGTTCTAG 100
||||||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000270__ 51 GCCAGGGATCGGACCGAAAACAGCGGTTCGTCTGGCTTTTTTTGTTCTAG 100
BSNT_00041___ 101 GTATGAAAGAAGATGTAGTATTAGATTTTGCGAAAGCATTAGTAAATGCG 150
|||||||||||||...||||||.||||||||.||.||..|.||.||||||
RBAM_000270__ 101 GTATGAAAGAAGACACAGTATTGGATTTTGCTAAGGCGCTTGTCAATGCG 150
BSNT_00041___ 151 AAACGCAACCTGACATATTGTTCAGTTTGCGGGCATATTACAGATCAGGA 200
||.||.||.|||||||||||.||..|||||||.|||||.||||||||.||
RBAM_000270__ 151 AAGCGGAATCTGACATATTGCTCGATTTGCGGACATATAACAGATCAAGA 200
BSNT_00041___ 201 CCCTTGCTATATATGTGAAGATACGCGCAGGGATAAGTCTGTTATCTGTG 250
||||||.|||||||||||.||.||..|.|||||||||||||||||.||||
RBAM_000270__ 201 CCCTTGTTATATATGTGAGGACACAAGAAGGGATAAGTCTGTTATTTGTG 250
BSNT_00041___ 251 TTGTGCAAGACCCTAAGGATGTTATCGCTATGGAGAAAATGAAGGAATAC 300
|.|||||.||||||||||||||.|||||.||||||||||||||||||||.
RBAM_000270__ 251 TCGTGCAGGACCCTAAGGATGTGATCGCAATGGAGAAAATGAAGGAATAT 300
BSNT_00041___ 301 AACGGACAGTATCACGTTCTTCACGGCGCTATTTCTCCAATGGACGGCAT 350
|||||.|||||.||.||||||||||||||.|||||.||||||||||||||
RBAM_000270__ 301 AACGGCCAGTACCATGTTCTTCACGGCGCGATTTCACCAATGGACGGCAT 350
BSNT_00041___ 351 TGGACCGGAGGATATTAAAATACCAGAATTGTTAAAACGATTACAGGATG 400
.||.||||||||||||||.||.||.||..||.|.|||||..|.|||||||
RBAM_000270__ 351 CGGCCCGGAGGATATTAAGATTCCGGAGCTGCTGAAACGTCTTCAGGATG 400
BSNT_00041___ 401 ATCAAGTGACAGAAGTGATCCTCGCGACAAACCCTAATATAGAAGGGGAA 450
||||||||||||||||.||.|||||.||.|||||||||||.|||||||||
RBAM_000270__ 401 ATCAAGTGACAGAAGTTATTCTCGCAACCAACCCTAATATTGAAGGGGAA 450
BSNT_00041___ 451 GCAACGGCGATGTATATATCAAGGCTCCTCAAGCCGTCTGGTATTAAGCT 500
|||||.||||||||||||||||||||..|.|||||.||.||.||.|||||
RBAM_000270__ 451 GCAACAGCGATGTATATATCAAGGCTGTTAAAGCCCTCAGGCATCAAGCT 500
BSNT_00041___ 501 CTCCCGTATTGCCCACGGACTGCCCGTCGGCGGTGACTTGGAATATGCTG 550
||||||||||||||||||.|||||||||||||||||.|||||||||||||
RBAM_000270__ 501 CTCCCGTATTGCCCACGGTCTGCCCGTCGGCGGTGATTTGGAATATGCTG 550
BSNT_00041___ 551 ACGAGGTCACTCTTTCTAAAGCACTTGAAGGAAGACGCGAATTGTAA 597
|.||||||||||||||.|||||.||||||||||||||.|||||.|||
RBAM_000270__ 551 ATGAGGTCACTCTTTCAAAAGCTCTTGAAGGAAGACGTGAATTATAA 597
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