Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00065 and RBAM_000410

See Amino acid alignment / Visit BSNT_00065 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:50
# Commandline: needle
#    -asequence dna-align/BSNT_00065___yaaT.1.9828.seq
#    -bsequence dna-align/RBAM_000410___yaaT.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00065___yaaT-RBAM_000410___yaaT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00065___yaaT-RBAM_000410___yaaT.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00065___yaaT
# 2: RBAM_000410___yaaT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 828
# Identity:     711/828 (85.9%)
# Similarity:   711/828 (85.9%)
# Gaps:           0/828 ( 0.0%)
# Score: 3087.0
# 
#
#=======================================

BSNT_00065___      1 TTGTACAATGTAATTGGTGTCCGCTTTAAGAAAGCGGGTAAAATATATTA     50
                     ||||||||.|||||.||.|||||||||||.||||||||.|||||.|||||
RBAM_000410__      1 TTGTACAACGTAATAGGCGTCCGCTTTAAAAAAGCGGGGAAAATTTATTA     50

BSNT_00065___     51 TTTTGATCCGAATGGATTTCATATAGAACATGACAGCTGCGTAATTGTAG    100
                     ||||||||||||.||||||.||||||||||.|||||||||||.|||||.|
RBAM_000410__     51 TTTTGATCCGAACGGATTTGATATAGAACAAGACAGCTGCGTCATTGTTG    100

BSNT_00065___    101 AAACTGTCAGAGGCGTTGAGTACGGCCAGGTCGTAATTGCAAATAAACAG    150
                     ||||.||.|||||.||.||.|||||.|||||.||.||.|||||||||||.
RBAM_000410__    101 AAACCGTAAGAGGTGTCGAATACGGGCAGGTTGTCATCGCAAATAAACAA    150

BSNT_00065___    151 GTGGATGAGCATGATGTGGTGCTTCCCCTTCGAAAAGTGATACGTGTGGC    200
                     |||||.|||||||||||.||||||||.||||||||.||.|||||.||.||
RBAM_000410__    151 GTGGACGAGCATGATGTTGTGCTTCCGCTTCGAAAGGTCATACGCGTTGC    200

BSNT_00065___    201 TGACGAGCGCGATCTTCTCATTGTAGAAGAAAATAAACAGGAAGCACTAT    250
                     |||.||.||||||||||||||||||||||||||.||||||||.||.||.|
RBAM_000410__    201 TGATGAACGCGATCTTCTCATTGTAGAAGAAAACAAACAGGAGGCCCTGT    250

BSNT_00065___    251 CAGCATTTGATATCTGCCAAAAGAAAGTGATTGAGCATGGCTTGGATATG    300
                     |.||.|||||..||||.||.||.||||||..|||.||.|||||.||||||
RBAM_000410__    251 CCGCTTTTGAAGTCTGTCAGAAAAAAGTGGCTGACCACGGCTTAGATATG    300

BSNT_00065___    301 AAGCTGGTCGATGTTGAATTCACGTTTGATCGCAATAAAGTCATTTTTTA    350
                     ||||||||.||||||||.||.||.|||||.||||||||||||||||||||
RBAM_000410__    301 AAGCTGGTTGATGTTGAGTTTACATTTGACCGCAATAAAGTCATTTTTTA    350

BSNT_00065___    351 CTTCACTGCTGACGGCCGAGTCGACTTTAGAGAGCTTGTAAAGGATTTGG    400
                     |||.||.||.|||||.||.||.||.||.||.||..|.||.||.||.||||
RBAM_000410__    351 CTTTACAGCAGACGGACGGGTTGATTTCAGGGAATTGGTCAAAGACTTGG    400

BSNT_00065___    401 CTTCTATCTTTAAGACAAGAATTGAGCTGCGCCAAATCGGAGTGAGGGAT    450
                     |||||||||||||.||.|||||.||..|||||||||||||.||||||||.
RBAM_000410__    401 CTTCTATCTTTAAAACGAGAATCGAATTGCGCCAAATCGGGGTGAGGGAC    450

BSNT_00065___    451 GAGGCAAAAATGCTCGGAGGAATCGGTCCTTGCGGAAGAATGCTTTGCTG    500
                     |||||.|||||||||||.||.|||||.||.|||||.||||||||||||||
RBAM_000410__    451 GAGGCGAAAATGCTCGGCGGTATCGGACCATGCGGGAGAATGCTTTGCTG    500

BSNT_00065___    501 TTCAACGTTTCTTGGAGATTTTGAACCCGTTTCCATTAAAATGGCCAAGG    550
                     .||.|||||.||.||.|||||||||||.||.|||||.||||||||.||||
RBAM_000410__    501 CTCCACGTTCCTCGGTGATTTTGAACCGGTGTCCATCAAAATGGCGAAGG    550

BSNT_00065___    551 ATCAGAACTTGTCTTTAAATCCTACGAAGATTTCGGGTCTTTGCGGACGA    600
                     ||||.||.||.||.||.||.||.|||||||||||.|||||.|||||.||.
RBAM_000410__    551 ATCAAAATTTATCGTTGAACCCAACGAAGATTTCCGGTCTGTGCGGCCGT    600

BSNT_00065___    601 TTGATGTGCTGTCTAAAATATGAGAACGATGAGTATGAGACGGCAAAAGA    650
                     ||||||||||||.|.||.||.||.||.|||||||||||||||||||||||
RBAM_000410__    601 TTGATGTGCTGTTTGAAGTACGAAAATGATGAGTATGAGACGGCAAAAGA    650

BSNT_00065___    651 ACAGCTTCCGGATATAGGAGAAATGATTACGACAGCAAACGGTCCCGCGA    700
                     ||||||.||||||.||||.||||||||||||||.||||||||.|||||.|
RBAM_000410__    651 ACAGCTGCCGGATTTAGGCGAAATGATTACGACGGCAAACGGCCCCGCAA    700

BSNT_00065___    701 AGGTCGTCGGACTAAATATTCTGGAACGGGTGCTTCAGGTGGAACTGATA    750
                     ||||.|||||.||.||||||||||||||||||||||||||||||||||..
RBAM_000410__    701 AGGTTGTCGGTCTTAATATTCTGGAACGGGTGCTTCAGGTGGAACTGAAG    750

BSNT_00065___    751 AACCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG    800
                     ||.|||||||||||||||||||||||||||||||||||||||||||||||
RBAM_000410__    751 AATCGTGAAAAAGTGATAGAATATACTTGGGAAGAGCTCTTGGAAGAGGG    800

BSNT_00065___    801 CGTCGTATCCGCACAAACCACAGATTAA    828
                     ||||||||||||||||||||||||||||
RBAM_000410__    801 CGTCGTATCCGCACAAACCACAGATTAA    828


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