Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00069 and RBAM_000440
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:50
# Commandline: needle
# -asequence dna-align/BSNT_00069.1.9828.seq
# -bsequence dna-align/RBAM_000440___yazA.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00069-RBAM_000440___yazA.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00069-RBAM_000440___yazA.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00069
# 2: RBAM_000440___yazA
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 300
# Identity: 97/300 (32.3%)
# Similarity: 97/300 (32.3%)
# Gaps: 186/300 (62.0%)
# Score: 417.0
#
#
#=======================================
BSNT_00069 0 -------------------------------------------------- 0
RBAM_000440__ 1 ATGGAGACAAATAGTCATTTCTTTTATGTGCTGCTGTGCAATGACAACAG 50
BSNT_00069 0 -------------------------------------------------- 0
RBAM_000440__ 51 TCTGTATGCCGGTTATACAAATGATCTGCAAAAACGGCTGAAAACCCACA 100
BSNT_00069 0 -------------------------------------------------- 0
RBAM_000440__ 101 ATGAGGGAAAGGGCGCGAAGTACACAAGGGCGCGGAGGCCGGTTTCGTTA 150
BSNT_00069 1 ------------------------------------ATGCAGGCGGAATA 14
||||||||||||||
RBAM_000440__ 151 TGCCATGCGGAATCATTTGAAACAAAACGGGAAGCGATGCAGGCGGAATA 200
BSNT_00069 15 TTATTTCAAAAAACTAACTCGAAAGAAAAAAGAGCTTTATATAGAAGAAA 64
...|||.|||.|.||.||.||||||||||||||||..|||||||||||||
RBAM_000440__ 201 CCGTTTTAAACAGCTGACCCGAAAGAAAAAAGAGCAATATATAGAAGAAA 250
BSNT_00069 65 AGCGGAACAGCAAGGAGGCTGTATATGTTAAGGCGCCAAATGAGCTTTAA 114
|.||...|||||||||||||||||||||||||.|||||.|||||.|||||
RBAM_000440__ 251 AACGACGCAGCAAGGAGGCTGTATATGTTAAGACGCCAGATGAGTTTTAA 300
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