Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00097 and RBAM_000670
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Amino acid alignment /
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:53
# Commandline: needle
# -asequence dna-align/BSNT_00097___yabN.1.9828.seq
# -bsequence dna-align/RBAM_000670___yabN.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00097___yabN-RBAM_000670___yabN.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00097___yabN-RBAM_000670___yabN.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00097___yabN
# 2: RBAM_000670___yabN
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1506
# Identity: 1138/1506 (75.6%)
# Similarity: 1138/1506 (75.6%)
# Gaps: 66/1506 ( 4.4%)
# Score: 4212.0
#
#
#=======================================
BSNT_00097___ 1 ATGGCGGGTAAAATTACAGTCGTCGGACTTGGTGCCGGAGACATGGACCA 50
|||||.|||||.|||||.||||||||.||.||.||||||||||||||.||
RBAM_000670__ 1 ATGGCAGGTAACATTACGGTCGTCGGCCTCGGCGCCGGAGACATGGATCA 50
BSNT_00097___ 51 ATTGACAATTGGTATACACAAGCTGCTGACGAAGGCAGATACGC---TGT 97
.||||||.|.||.|||||.|||||||||||..|||| .|.|| |.|
RBAM_000670__ 51 GTTGACAGTGGGCATACATAAGCTGCTGACTCAGGC---GAAGCATTTAT 97
BSNT_00097___ 98 ATGTCAGAACCAAGGATCATCCTTTAATTGAGGAGCTTGAAAAAGAAACG 147
||.|.|||||.||.||.||.|||||.|||..|||..|.||..||||.|||
RBAM_000670__ 98 ATATAAGAACGAAAGACCACCCTTTGATTCCGGAATTAGAGCAAGAGACG 147
BSNT_00097___ 148 AA---GAACATCCGTTACTTTGACGATATATATGAGAAACATGATCAGTT 194
.| |.|||||||.||.|||||.|||||.|||||.||||||||||||||
RBAM_000670__ 148 GAAGCGGACATCCGGTATTTTGATGATATTTATGAAAAACATGATCAGTT 197
BSNT_00097___ 195 CGAGGCGGTATATGAAGAAATTGCAGATATCCTCTTTGAAGCGGCGCGGC 244
.||.|||||.||||||||.||.||.||.||.||.||||||...|||..||
RBAM_000670__ 198 TGAAGCGGTCTATGAAGAGATCGCGGACATTCTGTTTGAAAAAGCGAAGC 247
BSNT_00097___ 245 GTGAGGACGTGGTTTACGCTGTGCCGGGACACCCTTTTGTCGCAGAAAAA 294
..|||||.||.||.|||||||||||.||.||.||.||||||||.||.|||
RBAM_000670__ 248 AAGAGGATGTCGTCTACGCTGTGCCCGGGCATCCGTTTGTCGCTGAGAAA 297
BSNT_00097___ 295 ACAGTTCAGCTGCT-----GACGGAGCGGGAGG---AAAAGGAAAACGTT 336
||.|||||||||.| .||| .|||||.| ||.|||.|...|||
RBAM_000670__ 298 ACCGTTCAGCTGTTATTTGAACG--CCGGGAAGAACAACAGGTAGCTGTT 345
BSNT_00097___ 337 CA-AGTGAAAGTCGCGGGTGGACAAAGTTTCCTTGATGCCACATTCAATG 385
|| |.| ||.||.||.|||||.||..|.|||||||..||.||||
RBAM_000670__ 346 CATACT-------GCCGGAGGGCAAAGCTTTTTGGATGCCATTTTTAATG 388
BSNT_00097___ 386 CCTTGCAAATTGACCCGATTGAAGGTTTTCAATTTGTGGATGCCGGC--A 433
|.||||.||||||.|||||||||||.|||||||||..|||||| || |
RBAM_000670__ 389 CATTGCGAATTGATCCGATTGAAGGGTTTCAATTTACGGATGC--GCAAA 436
BSNT_00097___ 434 CATTGTCCGCGGATGAGCTTGAGCTCAGACATCATCTGATCATATGTCAG 483
||.||.|..||||||||||.||.|||.|.|||||.||||||||.||.|||
RBAM_000670__ 437 CAATGACGCCGGATGAGCTCGAACTCCGCCATCACCTGATCATTTGCCAG 486
BSNT_00097___ 484 GTTTACGACCAAATGACGGCTTCTGAAGTCAAGCTGACATTGATGGAGAA 533
|||||.||||||||||||||.|||||.||.||||||||..|.||||||||
RBAM_000670__ 487 GTTTATGACCAAATGACGGCCTCTGAGGTGAAGCTGACGCTTATGGAGAA 536
BSNT_00097___ 534 GCTGCCTGATGATTATGAGGTCGTCATTGTGACTGCAGCAGGCAGCCGTG 583
..|||||||.||.|||||.||.|||||.||.||.|||||.||.|||...|
RBAM_000670__ 537 ATTGCCTGACGACTATGAAGTGGTCATCGTCACGGCAGCCGGAAGCAAGG 586
BSNT_00097___ 584 GCGAGGAGAT---CAAGACAGTGCCATTATTTGAGCTGGACCGCAATGTC 630
|.||..|||| |||| |||||.||.||||||||.|||||||||||.
RBAM_000670__ 587 GAGAAAAGATGACCAAG---GTGCCTTTGTTTGAGCTTGACCGCAATGTA 633
BSNT_00097___ 631 GCCTTGAACAACTTAACAAGTGTGTATATTCCGCCGATTAAAGAAG-AGA 679
|...|.||.|||||||||||.||||||.||||||||||||||.||| |||
RBAM_000670__ 634 GAAATAAATAACTTAACAAGCGTGTATGTTCCGCCGATTAAAAAAGAAGA 683
BSNT_00097___ 680 AGCTGCTTTATCACGAATTCTCCACGTTCCGAAGCATCATCAGAGAGCTT 729
| ||.|||||.||.|||||.||..|.||||||||.||.||..|.||||||
RBAM_000670__ 684 A-CTCCTTTACCAGGAATTTTCTGCATTCCGAAGTATTATTCGCGAGCTT 732
BSNT_00097___ 730 CGCGGACCTAATGGATGTCCGTGGGATAAAAAGCAGACGCATCAGTCATT 779
|||||.||.||.||.||||||||||||.||||||||||.||.||||||||
RBAM_000670__ 733 CGCGGGCCGAACGGCTGTCCGTGGGATCAAAAGCAGACACACCAGTCATT 782
BSNT_00097___ 780 AAAGCAGTACATGATTGAAGAATGTTATGAGCTTCTCGAAGCTATTGACG 829
||||.||||.||||||||.|||||.||.||.||.||.||.||.|||||||
RBAM_000670__ 783 AAAGAAGTATATGATTGAGGAATGCTACGAACTGCTTGAGGCCATTGACG 832
BSNT_00097___ 830 AAGAAGACACAGACCATATGATCGAAGAGCTTGGTGACGTTTTGCTTCAG 879
||||.|||||.||.||.|||||.|||||.||.||.|||||..||||||||
RBAM_000670__ 833 AAGAGGACACGGATCACATGATAGAAGAACTCGGGGACGTCATGCTTCAG 882
BSNT_00097___ 880 GTCTTGCTTCACGCGCAAATTGGTGAAGATGAAGGTTATTTCACAATTGA 929
||..||||.|||||.||.||.||.|||||.||.||.||||||.|||||||
RBAM_000670__ 883 GTTATGCTGCACGCCCAGATCGGAGAAGACGAGGGGTATTTCTCAATTGA 932
BSNT_00097___ 930 TGATGTCATAAAAGGAATCAGTGAAAAAATGGTCCGAAGACATCCCCATG 979
|||||||||.|.||..|||||||..||.||||||.||.|.||.||.||||
RBAM_000670__ 933 TGATGTCATCAGAGACATCAGTGCGAAGATGGTCAGACGGCACCCGCATG 982
BSNT_00097___ 980 TGTTTAAAGATGTTAAGGTTCAGGATGAAAACGATGTTTTGGCCAATTGG 1029
|||||||.|||||||||||||||||||||.|.|||||..|.|||||.|||
RBAM_000670__ 983 TGTTTAAGGATGTTAAGGTTCAGGATGAACATGATGTCGTCGCCAACTGG 1032
BSNT_00097___ 1030 GAAGATATAAAAAAGGCCGAAA---AAAATACATCTGAATCA--TCGTTA 1074
|||||.||.||||||||.|||| |||..||||| || ||.||.
RBAM_000670__ 1033 GAAGAAATCAAAAAGGCGGAAAAGCAAACAACATC-----CACTTCATTG 1077
BSNT_00097___ 1075 CTAGACAGCGTACCGAAAACCCTTCCAGCTCTTTCGAAAGCTGCTAAATT 1124
||.||...|||.||||||||.||.||..|||||.|.|||||.||.||..|
RBAM_000670__ 1078 CTGGATGCCGTGCCGAAAACACTGCCTTCTCTTGCAAAAGCGGCCAAGCT 1127
BSNT_00097___ 1125 GCAGAAAAAAGCAGCGAAGGTCGGTTTTGACTGGGAAGACG-TCAGCGAT 1173
.|||||||||||.||.||..||||.|||||||||||.|||| |||| |||
RBAM_000670__ 1128 TCAGAAAAAAGCCGCAAAAATCGGCTTTGACTGGGATGACGTTCAG-GAT 1176
BSNT_00097___ 1174 ATTTGGGAAAAGGTAAGTGAGGAAATGAAGGAGTTTTCTTCTGAGGTTT- 1222
||.|||||.||.||||.|||.||..|||||||.||||||.|.||||.||
RBAM_000670__ 1177 ATATGGGATAAAGTAAATGAAGAGCTGAAGGAATTTTCTGCAGAGGCTTC 1226
BSNT_00097___ 1223 --CTGAAGCTCCTCACGAACACAATC----TTAAAGCTGAGTTTGGCGAC 1266
|.|||.|..|..|.|| |||| |.||||||||.||.|||||.
RBAM_000670__ 1227 CGCCGAATCAGCAGATGA----AATCAGCTTAAAAGCTGAATTCGGCGAT 1272
BSNT_00097___ 1267 ATTTTGTTCGCGCTGGTGAATGTAGCCCGCTTCTACAAAATAGAGCCAGA 1316
.||||.||.||..||||.|||.|.|.|||.|.|||.|||||.|||||.||
RBAM_000670__ 1273 GTTTTATTTGCATTGGTCAATATCGGCCGATACTATAAAATTGAGCCTGA 1322
BSNT_00097___ 1317 GGAAGCGCTGGCCATGACTAATGACAAATTCCGGAGACGGTTCTCGTACA 1366
|||||||||.||||||||.|||||||||||.||.|||||.||..|.||.|
RBAM_000670__ 1323 GGAAGCGCTCGCCATGACAAATGACAAATTTCGCAGACGCTTTGCTTATA 1372
BSNT_00097___ 1367 TTGAGGAAACAGC-GAAGGAAGAGGGAGTCGAGTTGGCTGATATGTCCCT 1415
|||||.||..||| |.||.|| ||||..|.||.|||.|.|..|||||.||
RBAM_000670__ 1373 TTGAGAAAGAAGCGGCAGCAA-AGGGCCTTGAATTGACCGCAATGTCACT 1421
BSNT_00097___ 1416 TGAGGACATGGACAAACTGTGGAATGAAGCAAAAGAAACTGAGAGGAGAT 1465
||||||.|||||||||.|||||.|||||||||||||||..||||||||||
RBAM_000670__ 1422 TGAGGAAATGGACAAATTGTGGGATGAAGCAAAAGAAATGGAGAGGAGAT 1471
BSNT_00097___ 1466 CATAG- 1470
..| |
RBAM_000670__ 1472 TCT-GA 1476
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