Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00120 and RBAM_000790
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:54
# Commandline: needle
# -asequence dna-align/BSNT_00120___hprT.1.9828.seq
# -bsequence dna-align/RBAM_000790___hprT.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00120___hprT-RBAM_000790___hprT.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00120___hprT-RBAM_000790___hprT.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00120___hprT
# 2: RBAM_000790___hprT
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 544
# Identity: 491/544 (90.3%)
# Similarity: 491/544 (90.3%)
# Gaps: 5/544 ( 0.9%)
# Score: 2243.0
#
#
#=======================================
BSNT_00120___ 1 ATGATGAAACATGATATCGAGAAAGTACTGATCTCAGAGGAAGAGATACA 50
||||||||.||||||||.|||||.|||||||||||.||.|||||.||
RBAM_000790__ 1 ---ATGAAACAGGATATCGAAAAAGTGCTGATCTCAGAAGATGAGATCCA 47
BSNT_00120___ 51 AAAGAAAGTAAAAGAGTTAGGTGCAGAATTAACGAGCGAGTATCA-AGAT 99
..|||||||||||.||.|.||.|.|.|||||||.|||||||| || .||.
RBAM_000790__ 48 GCAGAAAGTAAAACAGCTTGGAGAACAATTAACAAGCGAGTA-CAGCGAC 96
BSNT_00120___ 100 ACATTTCCGTTGGCAATCGGTGTGTTAAAAGGAGCACTTCCTTTTATGGC 149
||.||||||||||||||||||||||||||.|||||.||||||||||||||
RBAM_000790__ 97 ACGTTTCCGTTGGCAATCGGTGTGTTAAAGGGAGCGCTTCCTTTTATGGC 146
BSNT_00120___ 150 GGATCTTATCAAGCATATTGATACATATTTGGAAATGGATTTCATGGATG 199
.||||||||.|||||||||||||||||||||||||||||.||||||||||
RBAM_000790__ 147 TGATCTTATAAAGCATATTGATACATATTTGGAAATGGACTTCATGGATG 196
BSNT_00120___ 200 TATCAAGCTACGGAAATTCTACGGTTTCTTCTGGAGAAGTAAAAATCATT 249
|||||||||||||||||||.|||||||||||.||||||||.||||||||.
RBAM_000790__ 197 TATCAAGCTACGGAAATTCCACGGTTTCTTCCGGAGAAGTCAAAATCATC 246
BSNT_00120___ 250 AAAGATTTGGATACATCTGTAGAGGGCCGGGACATCTTAATTATTGAAGA 299
|||||||||||||||||||||||.|||||||||||||||||.||||||||
RBAM_000790__ 247 AAAGATTTGGATACATCTGTAGAAGGCCGGGACATCTTAATCATTGAAGA 296
BSNT_00120___ 300 TATCATCGACAGTGGGTTAACCTTAAGTTATCTCGTAGAGCTCTTCCGAT 349
|||.||||||||||||||||||||.||.|||||||||||.||||||||||
RBAM_000790__ 297 TATTATCGACAGTGGGTTAACCTTGAGCTATCTCGTAGAACTCTTCCGAT 346
BSNT_00120___ 350 ACCGTAAAGCAAAATCAATTAAGATTGTTACCCTTTTGGATAAACCGAGC 399
|.||||||||.|||||||||||||||||||||||.|||||||||||.|||
RBAM_000790__ 347 ATCGTAAAGCGAAATCAATTAAGATTGTTACCCTGTTGGATAAACCAAGC 396
BSNT_00120___ 400 GGAAGAAAAGCGGACATCAAAGCAGACTTTGTCGGTTTTGAAGTTCCTGA 449
|||||||||||||||||.|||||.|||||.||.|||||||||||||||||
RBAM_000790__ 397 GGAAGAAAAGCGGACATTAAAGCTGACTTCGTAGGTTTTGAAGTTCCTGA 446
BSNT_00120___ 450 CGCGTTTGTAGTGGGTTACGGACTTGATTATGCTGAGCGCTATCGCAATC 499
|||||||||.|||||||||||||||||||||||.||.|||||||||||||
RBAM_000790__ 447 CGCGTTTGTTGTGGGTTACGGACTTGATTATGCCGAACGCTATCGCAATC 496
BSNT_00120___ 500 TGCCTTATATCGGAGTGTTAAAACCGGCAGTTTATGAAAGCTGA 543
|||||||.||||||||.|||||||||||..||||||||||||||
RBAM_000790__ 497 TGCCTTACATCGGAGTATTAAAACCGGCGATTTATGAAAGCTGA 540
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