Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00182 and RBAM_001130
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00182___yacK.1.9828.seq
# -bsequence dna-align/RBAM_001130___yacK.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00182___yacK-RBAM_001130___yacK.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00182___yacK-RBAM_001130___yacK.aln
########################################
#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00182___yacK
# 2: RBAM_001130___yacK
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 1084
# Identity: 880/1084 (81.2%)
# Similarity: 880/1084 (81.2%)
# Gaps: 2/1084 ( 0.2%)
# Score: 3572.0
#
#
#=======================================
BSNT_00182___ 1 ATGGAAAAAGAGAAAAAAGGGGCGAAACACGAGTTAGACCTGTCATCTAT 50
|||||||||||||||||||||||||||||.|||.|.||||||||..|.||
RBAM_001130__ 1 ATGGAAAAAGAGAAAAAAGGGGCGAAACAAGAGCTTGACCTGTCTGCAAT 50
BSNT_00182___ 51 ATTGCAGTTTGTTGCTCCGGGTACACCGCTCAGAGCGGGGATGGAAAACG 100
..|||||||.|||||.|||||.||.|||||||||||.|||||.||.||.|
RBAM_001130__ 51 TCTGCAGTTCGTTGCACCGGGCACCCCGCTCAGAGCCGGGATAGAGAATG 100
BSNT_00182___ 101 T-CTTGAGAGCAAATACAGGCGGTCTGATTGTTGTTGGATATAATGATAA 149
| ||| .|.||||||||||||||.|||||||||||.|||||.||||||||
RBAM_001130__ 101 TACTT-CGGGCAAATACAGGCGGCCTGATTGTTGTCGGATACAATGATAA 149
BSNT_00182___ 150 AGTAAAAGAAGTGGTGGACGGCGGCTTTCACATAAACACGGCTTTTTCTC 199
.|||||..||||.|||||.|||||.|||||.||.||.||..|.|||.|.|
RBAM_001130__ 150 GGTAAAGCAAGTCGTGGATGGCGGTTTTCATATTAATACATCATTTGCGC 199
BSNT_00182___ 200 CGGCGCATTTATATGAGTTGGCTAAAATGGATGGAGCGATCATTTTAAGT 249
|.||.||.|||||.|||.||||.||||||||.||.||.||.|||||||||
RBAM_001130__ 200 CCGCTCACTTATACGAGCTGGCCAAAATGGACGGTGCCATTATTTTAAGT 249
BSNT_00182___ 250 GATTCGGGTCAAAAGATCCTCTACGCGAATACTCAGCTGATGCCGGATGC 299
|||||.||.||.||.||.||.||.||||||||.|||||.||||||||.||
RBAM_001130__ 250 GATTCCGGCCAGAAAATTCTTTATGCGAATACGCAGCTTATGCCGGAAGC 299
BSNT_00182___ 300 CACAATTTCTTCATCAGAAACAGGAATGCGGCACAGAACTGCCGAAAGAG 349
.||.||||||||.||||||||.||||||.|||||.|.||.||.|||.|.|
RBAM_001130__ 300 GACCATTTCTTCTTCAGAAACGGGAATGAGGCACCGTACGGCGGAACGGG 349
BSNT_00182___ 350 TAGCTAAGCAAACTGGCTGTCTTGTAATCGCTATTTCTGAAAGAAGAAAT 399
|.||.|||||.||.||||||||.||.||.||.||||||||..|.||||||
RBAM_001130__ 350 TGGCGAAGCAGACCGGCTGTCTCGTCATTGCCATTTCTGAGCGCAGAAAT 399
BSNT_00182___ 400 GTCATAACGTTATATCAGGAAAACATGAAGTATACACTAAAAGACATAGG 449
|||||.||||||||||||||.|.|||||||||.||||||||.||||||||
RBAM_001130__ 400 GTCATTACGTTATATCAGGACAGCATGAAGTACACACTAAAGGACATAGG 449
BSNT_00182___ 450 ATTTATTTTAACCAAGGCGAACCAAGCCATTCAAACACTTGAAAAGTATA 499
||||||||||||.|||||.||.||.|||||||||||.|||||.|||||||
RBAM_001130__ 450 ATTTATTTTAACAAAGGCAAATCAGGCCATTCAAACGCTTGAGAAGTATA 499
BSNT_00182___ 500 AGACAATCCTCGATAAAACGATTAATGCACTGAACGCGTTAGAGTTTGAG 549
|.||.||..|.||.||||||||||..||..|.|||||.||||||||||||
RBAM_001130__ 500 AAACCATTTTAGACAAAACGATTACGGCTTTAAACGCATTAGAGTTTGAG 549
BSNT_00182___ 550 GAACTTGTTACCTTCAGTGATGTCTTGTCTGTCATGCATCGTTATGAAAT 599
||.|||||.||.||||||||.||..||||.|||||||||||.||||||||
RBAM_001130__ 550 GAGCTTGTGACATTCAGTGACGTGCTGTCCGTCATGCATCGATATGAAAT 599
BSNT_00182___ 600 GGTACTGAGAATCAAAAACGAAATTAATATGTATATCAAAGAGCTGGGGA 649
|||.||..||||.|||||.|||||.|||||||||||.|||||.||.||.|
RBAM_001130__ 600 GGTGCTCCGAATAAAAAATGAAATCAATATGTATATTAAAGAACTCGGAA 649
BSNT_00182___ 650 CAGAAGGGCATCTGATCAAACTGCAAGTCATTGAATTGATTACGGATATG 699
|.|||||.||..|.|||...|||||.||.||||||.||||||||||.|||
RBAM_001130__ 650 CGGAAGGCCACTTAATCCGTCTGCAGGTGATTGAACTGATTACGGACATG 699
BSNT_00182___ 700 GAAGAAGAGGCCGCTTTATTTATTAAGGACTATGTAAAAGAAAAGATTAA 749
|||||||||||.||..|.||.|||||.||||||||.||||||||.||.||
RBAM_001130__ 700 GAAGAAGAGGCGGCACTTTTCATTAAAGACTATGTCAAAGAAAAAATCAA 749
BSNT_00182___ 750 AGATCCGTTTGTCCTCTTGAAGGAGCTGCAGGATATGTCCAGTTATGATC 799
|||||||||.||.||.||.||.|||||.||||||||||||||.|||||.|
RBAM_001130__ 750 AGATCCGTTCGTGCTGTTAAAAGAGCTTCAGGATATGTCCAGCTATGACC 799
BSNT_00182___ 800 TGCTGGATGATTCCATTGTGTATAAGCTTCTCGGTTACCCTGCTTCTACT 849
||||.||||||||||||.|||.||||||.||.||.||.||.||||||||.
RBAM_001130__ 800 TGCTTGATGATTCCATTCTGTTTAAGCTGCTTGGATATCCGGCTTCTACC 849
BSNT_00182___ 850 AATCTTGATGATTATGTATTGCCGAGAGGATACAGGCTGTTAAATAAGAT 899
|||.|||||||||||||..|.||||||||||||||||||.|.||.||.||
RBAM_001130__ 850 AATATTGATGATTATGTGCTCCCGAGAGGATACAGGCTGCTGAACAAAAT 899
BSNT_00182___ 900 ACCGCGTCTTCCGATGCCGATTGTTGAAAATGTTGTAGAAGCATTTGGAG 949
.||||||||.|||||||||||||||||||||||.||.||.||.||.|||.
RBAM_001130__ 900 TCCGCGTCTGCCGATGCCGATTGTTGAAAATGTGGTTGAGGCGTTCGGAT 949
BSNT_00182___ 950 TCCTGCCAAGGATTATTGAGGCGAGTGCAGAAGAATTAGATGAAGTAGAG 999
|..|||||||.||.|..||.||.|.||.||||||..|.|||||.||.|||
RBAM_001130__ 950 TTTTGCCAAGCATAACGGAAGCCACTGTAGAAGAGCTTGATGATGTTGAG 999
BSNT_00182___ 1000 GGAATCGGTGAAGTACGAGCCCAAAAAATCAAAAAAGGATTAAAACGCCT 1049
||.|||||.|||||.||.|||.||||||||||||||||.|||||||||||
RBAM_001130__ 1000 GGTATCGGCGAAGTGCGCGCCAAAAAAATCAAAAAAGGCTTAAAACGCCT 1049
BSNT_00182___ 1050 GCAAGAGAAGCATTATTTAGACAGACAACTGTGA 1083
.||.||.||.||.|||.||||.||||||||.|.|
RBAM_001130__ 1050 TCAGGAAAAACACTATATAGATAGACAACTTTAA 1083
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