Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00185 and RBAM_001150
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:57
# Commandline: needle
# -asequence dna-align/BSNT_00185___ispD.1.9828.seq
# -bsequence dna-align/RBAM_001150___ispD.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00185___ispD-RBAM_001150___ispD.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00185___ispD-RBAM_001150___ispD.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00185___ispD
# 2: RBAM_001150___ispD
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 720
# Identity: 522/720 (72.5%)
# Similarity: 522/720 (72.5%)
# Gaps: 42/720 ( 5.8%)
# Score: 1813.0
#
#
#=======================================
BSNT_00185___ 1 AT-GAGTTATGATGTGGTGATTCCTGCAGCCGGACAGGGAAAGCGGATGA 49
|| ||| ||||.|||.||.|||||.||.||||||||.|||||.|||||||
RBAM_001150__ 1 ATGGAG-TATGTTGTCGTTATTCCGGCTGCCGGACAAGGAAAACGGATGA 49
BSNT_00185___ 50 AGGCAGGGAGAAATAAACTGTTCATTGAGC-TGAAAGGAGACCCGGTGAT 98
||||.||||.||||||.||||||| |.||| |.|||||.|..||.||.||
RBAM_001150__ 50 AGGCCGGGAAAAATAAGCTGTTCA-TCAGCTTAAAAGGTGCGCCTGTTAT 98
BSNT_00185___ 99 CATACACACGTTAAGAGTGTTTGACAGCCACCGGCA--GTGCGATAAAAT 146
.||||||||..|..|.||.|||||.|||||| ||| .||..|.|||||
RBAM_001150__ 99 TATACACACACTGCGGGTTTTTGAAAGCCAC--GCACCCTGTCAGAAAAT 146
BSNT_00185___ 147 CATTTTGGTGATTAACGAGCAG-GAGCGGGAGCACTTTCAGCAATTGCTG 195
.||.||||||||.|||||| || ||.|||||..|.||||..||..|||||
RBAM_001150__ 147 AATCTTGGTGATAAACGAG-AGTGAACGGGAAGATTTTCGCCAGCTGCTG 195
BSNT_00185___ 196 TGCGATTACCCGTTTCAAACTTCAATTGAGCTTGTTGCAGGCGGAGAAGA 245
..|.|.|..|||.||||.||...|||||||||||||.|.||.||.|..||
RBAM_001150__ 196 GCCCAATTTCCGATTCAGACGGAAATTGAGCTTGTTACCGGAGGTGCGGA 245
BSNT_00185___ 246 GCGTCAGCACAGTGTGTATAAGGGGCTGAAAGCCGTAAAGCAGGAAAAGA 295
|||||||||||||||.||..|.||.||||||....|..|..|||||..|.
RBAM_001150__ 246 GCGTCAGCACAGTGTATACGAAGGACTGAAAATGATTGATAAGGAATCGG 295
BSNT_00185___ 296 TTGTCCTTGTACATGACGGTGCCCGCCCATTTATAAAACATGAACAAATT 345
|.||||||||.||||||||.||.|||||.|||.|.|.||||.|.||.||.
RBAM_001150__ 296 TCGTCCTTGTTCATGACGGAGCGCGCCCGTTTGTCACACATCAGCATATC 345
BSNT_00185___ 346 GA------CG----AACTGATCGCAGAGGCGGAACAGACAGGAGCGGCCA 385
|| || ||| .||||||| ||.|.||||||||..
RBAM_001150__ 346 GATAAGCTCGTTGAAAC----AGCAGAGG------AGGCGGGAGCGGCTG 385
BSNT_00185___ 386 TCCTTGCTGTTCCGGTAAAAGATACGATTAAACGCGTTCAAGATTTACAA 435
||||.||||||||.||.|||||.|||||.|||||.|...|||..|..|..
RBAM_001150__ 386 TCCTGGCTGTTCCTGTGAAAGACACGATAAAACGGGCGGAAGGCTCCCGG 435
BSNT_00185___ 436 GTCAGTGAGACGATTGAACGTTCAAGCTTGTGGGCTGTCCAAACGCCACA 485
||....|||||..||||.|||||||||||||||||.||.||||||||.||
RBAM_001150__ 436 GTTGCGGAGACCTTTGATCGTTCAAGCTTGTGGGCCGTTCAAACGCCGCA 485
BSNT_00185___ 486 AGCTTTTCGTCTTTCTTTATTGATGAAGGCTCACGCTGAGGCCGAGCGCA 535
|||||||||||||||||||||||.||.|||.||....||.||.||...||
RBAM_001150__ 486 AGCTTTTCGTCTTTCTTTATTGAAGACGGCGCATATGGAAGCGGAAAACA 535
BSNT_00185___ 536 AGGGATTTTTAGGGACGGATGACGCCAGCCTCGTTGAAC----AGATGGA 581
|.||.||.||||||||||||||||||||||||||.||.| .||||||
RBAM_001150__ 536 AAGGCTTCTTAGGGACGGATGACGCCAGCCTCGTCGAGCGTCTTGATGGA 585
BSNT_00185___ 582 GGGCGGT-TC-GGTCCGTGTTGTAGAAGGCAGCTATACAAATATTAAGCT 629
| || |||..||.|.||.||||||||||||||.|||||||||||
RBAM_001150__ 586 ------TATCAGGTGAGTATCGTTGAAGGCAGCTATACCAATATTAAGCT 629
BSNT_00185___ 630 GACGACGCCAGACGATTTGACGTCAGCTGAAGCTATCATGGAATCAGAAA 679
|||.|||||.||.||..|||..|..||.|||||.||||||.||.|.||||
RBAM_001150__ 630 GACAACGCCGGATGACCTGATATTTGCGGAAGCAATCATGAAAGCGGAAA 679
BSNT_00185___ 680 GTGGGAATAAACATGTTTAG 699
||||||||.|..||||||||
RBAM_001150__ 680 GTGGGAATCATAATGTTTAG 699
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