Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00194 and RBAM_001200

See Amino acid alignment / Visit BSNT_00194 in genome browser / Return to Orthologue table
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# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:58
# Commandline: needle
#    -asequence dna-align/BSNT_00194___yazC.1.9828.seq
#    -bsequence dna-align/RBAM_001200___yazC.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00194___yazC-RBAM_001200___yazC.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00194___yazC-RBAM_001200___yazC.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00194___yazC
# 2: RBAM_001200___yazC
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 436
# Identity:     367/436 (84.2%)
# Similarity:   367/436 (84.2%)
# Gaps:           8/436 ( 1.8%)
# Score: 1549.0
# 
#
#=======================================

BSNT_00194___      1 ATGCTTGAATTTGATAC-GATAAAAGATTCTAAGCAGCTTAACGGTCTTG     49
                     ||||||.||||||| || .|||||||||||.||||||.|.||||||||||
RBAM_001200__      1 ATGCTTCAATTTGA-ACAAATAAAAGATTCAAAGCAGTTAAACGGTCTTG     49

BSNT_00194___     50 CGCTTGCTTATATAGGTGATGCCATTTTTGAAGTGTATGTCAGGCATCAC     99
                     ||||.||||||||.||||||||||||||||||.|.||.|||.||||||||
RBAM_001200__     50 CGCTCGCTTATATGGGTGATGCCATTTTTGAAATATACGTCCGGCATCAC     99

BSNT_00194___    100 CTGCTTAAGCAGGGCTTTACCAAACCAAATGATCTTCATAAGAAATCAAG    149
                     ||||||||||||||||||||.|||||.|||||.|||||||||||..|.||
RBAM_001200__    100 CTGCTTAAGCAGGGCTTTACGAAACCGAATGACCTTCATAAGAAGGCGAG    149

BSNT_00194___    150 CCGGATTGTTTCAGCAAAGTCACAGGCTGAGATCCTATTTTT---TCTGC    196
                     |||||||||.||.|||||.||||||||.||   |.||||.||   .||.|
RBAM_001200__    150 CCGGATTGTATCGGCAAAATCACAGGCAGA---CATATTGTTCCGCCTTC    196

BSNT_00194___    197 AGAATCAATCATTTTTTACGGAAGAAGAGGAAGCGGTGCTGAAAAGAGGC    246
                     ||.|..||||.|||||.|||||.|||||||||||.|||||||.|||||||
RBAM_001200__    197 AGGACGAATCCTTTTTCACGGAGGAAGAGGAAGCCGTGCTGAGAAGAGGC    246

BSNT_00194___    247 AGAAATGCCAAGTCAGGGACAACACCTAAAAATACAGATGTTCAGACGTA    296
                     |||||.||.||.||||||||.||.||||||||.||||||||.||||||||
RBAM_001200__    247 AGAAACGCGAAATCAGGGACGACGCCTAAAAACACAGATGTACAGACGTA    296

BSNT_00194___    297 CCGCTACAGTACAGCATTTGAAGCGCTTCTGGGCTACCTTTTTCTAGAGA    346
                     ||||.|.||||||||.|||||.||..|.||.||.|||||||||||.||||
RBAM_001200__    297 CCGCCATAGTACAGCTTTTGAGGCTTTACTCGGATACCTTTTTCTTGAGA    346

BSNT_00194___    347 AAAAAGAGGAACGACTTAGTCAGCTCGTAGCCGAAGCTATACAATTCGGG    396
                     |||.|||.|||.||||.|.||||||..|.||.||.|||||||||.|||||
RBAM_001200__    347 AAAGAGAAGAAAGACTGAATCAGCTGATTGCTGAGGCTATACAAGTCGGG    396

BSNT_00194___    397 ACGTCAGGGAGGAAAACAAATGAGTCAGCAACATGA    432
                     ||||||||||||||||||||||||||||||||||||
RBAM_001200__    397 ACGTCAGGGAGGAAAACAAATGAGTCAGCAACATGA    432


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