Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195
DNA alignment: BSNT_00200 and RBAM_001260
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# Program: needle
# Rundate: Mon 8 Mar 2010 06:21:58
# Commandline: needle
# -asequence dna-align/BSNT_00200___nusG.1.9828.seq
# -bsequence dna-align/RBAM_001260___nusG.2.9828.seq
# -gapopen 10
# -gapextend 0.5
# -outfile dna-align/BSNT_00200___nusG-RBAM_001260___nusG.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00200___nusG-RBAM_001260___nusG.aln
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#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00200___nusG
# 2: RBAM_001260___nusG
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 535
# Identity: 472/535 (88.2%)
# Similarity: 472/535 (88.2%)
# Gaps: 2/535 ( 0.4%)
# Score: 2096.0
#
#
#=======================================
BSNT_00200___ 1 ATGGAAAAGAATTGGTATGTTGTTCACACGTACTCTGGTTATGAGAATAA 50
||||||||||||||||||||||||||.|||||.||.||||||||.||.||
RBAM_001260__ 1 ATGGAAAAGAATTGGTATGTTGTTCATACGTATTCCGGTTATGAAAACAA 50
BSNT_00200___ 51 AGTAAAAGCCAACTTGGAAAAACGTGTTGAATCAATGGGGATGCAGGATA 100
|||||||||.|||.|.|||||||||||.|||||||||||.||||||||||
RBAM_001260__ 51 AGTAAAAGCGAACCTTGAAAAACGTGTGGAATCAATGGGAATGCAGGATA 100
BSNT_00200___ 101 AAATTTTCCGTGTAGTCGTACCCGAAGAAGAAGAAACGGATATCAAAAAC 150
||||||||||.||.|||||.||.|||||||||||.||.|||||.||.|||
RBAM_001260__ 101 AAATTTTCCGCGTTGTCGTCCCTGAAGAAGAAGAGACTGATATTAAGAAC 150
BSNT_00200___ 151 GGCAAGAAAAAAGTCGTGAAAAAGAAAGTGTTCCCTGGTTATGTGCTTGT 200
||||||||||||||.||.|||||||||||||||||.||||||||||||||
RBAM_001260__ 151 GGCAAGAAAAAAGTAGTCAAAAAGAAAGTGTTCCCGGGTTATGTGCTTGT 200
BSNT_00200___ 201 TGAAATTGTAATGACAGACGACTCTTGGTATGTTGTCCGAAACACGCCGG 250
||||||.||.|||||.||.||.||.||||||||.|||||.||||||||||
RBAM_001260__ 201 TGAAATCGTCATGACTGATGATTCCTGGTATGTGGTCCGCAACACGCCGG 250
BSNT_00200___ 251 GCGTTACTGGATTCGTAGGATCTGCCGGGTCAGGTTCAAAACCGACGCCG 300
|||||||.||||||||.|||||.|||||.|||||.|||||.||.||.|||
RBAM_001260__ 251 GCGTTACCGGATTCGTCGGATCAGCCGGTTCAGGCTCAAAGCCTACTCCG 300
BSNT_00200___ 301 CTTCTTCCGGGCGAAGCAGAAACCATTCTGAAGA-GAATGGGCATGGATG 349
||||||||.||||||||.||||||| |||.||.| |.|||||||||||||
RBAM_001260__ 301 CTTCTTCCTGGCGAAGCGGAAACCA-TCTTAAAACGCATGGGCATGGATG 349
BSNT_00200___ 350 AACGCAAAACTGATATTGACTTTGAACTGAAAGAGACAGTGAAAGTAATA 399
|.||.|||||.||.|||||.||||||.||||.||||||||.|||||.|||
RBAM_001260__ 350 AGCGGAAAACCGACATTGATTTTGAATTGAATGAGACAGTCAAAGTCATA 399
BSNT_00200___ 400 GACGGACCTTTTGCTAACTTTACAGGATCAATTGAAGAGATTGATTATGA 449
|||||||||||.||.|||||||||||||||||||||||||||||||||||
RBAM_001260__ 400 GACGGACCTTTCGCCAACTTTACAGGATCAATTGAAGAGATTGATTATGA 449
BSNT_00200___ 450 TAAAAGCAAGGTCAAAGTTTTCGTTAATATGTTCGGCCGTGAAACGCCGG 499
|||.|||||.||.|||||.||||||||.||||||||||||||||||||||
RBAM_001260__ 450 TAAGAGCAAAGTGAAAGTATTCGTTAACATGTTCGGCCGTGAAACGCCGG 499
BSNT_00200___ 500 TTGAGCTGGAATTTACCCAAATCGATAAATTGTAA 534
||||.||||||||||||||.|||||.|||||||||
RBAM_001260__ 500 TTGAACTGGAATTTACCCAGATCGACAAATTGTAA 534
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