Natto Genome Project
Bacillus subtilis subsp. natto str. BEST195

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DNA alignment: BSNT_00205 and RBAM_001290

See Amino acid alignment / Visit BSNT_00205 in genome browser / Return to Orthologue table

########################################
# Program: needle
# Rundate: Mon  8 Mar 2010 06:21:59
# Commandline: needle
#    -asequence dna-align/BSNT_00205___rplJ.1.9828.seq
#    -bsequence dna-align/RBAM_001290___rplJ.2.9828.seq
#    -gapopen 10
#    -gapextend 0.5
#    -outfile dna-align/BSNT_00205___rplJ-RBAM_001290___rplJ.aln
# Align_format: srspair
# Report_file: dna-align/BSNT_00205___rplJ-RBAM_001290___rplJ.aln
########################################

#=======================================
#
# Aligned_sequences: 2
# 1: BSNT_00205___rplJ
# 2: RBAM_001290___rplJ
# Matrix: EDNAFULL
# Gap_penalty: 10.0
# Extend_penalty: 0.5
#
# Length: 501
# Identity:     467/501 (93.2%)
# Similarity:   467/501 (93.2%)
# Gaps:           0/501 ( 0.0%)
# Score: 2199.0
# 
#
#=======================================

BSNT_00205___      1 ATGAGCAGCGCAATTGAAACAAAAAAAGTTGTTGTTGAAGAAATTGCTTC     50
                     |||||||||||||||||.|||||||||||||||||||||||.||||||||
RBAM_001290__      1 ATGAGCAGCGCAATTGATACAAAAAAAGTTGTTGTTGAAGAGATTGCTTC     50

BSNT_00205___     51 TAAACTGAAAGAAAGTAAATCAACGATCATCGTTGACTATCGCGGACTTA    100
                     |||||||||||||||.|||||||||||||||||||||||.||||||||||
RBAM_001290__     51 TAAACTGAAAGAAAGCAAATCAACGATCATCGTTGACTACCGCGGACTTA    100

BSNT_00205___    101 ACGTTTCTGAAGTAACTGAACTTCGTAAACAGCTTCGCGAAGCTAACGTT    150
                     ||||||||||||||||||||||.||||||||||||||||||||||||||.
RBAM_001290__    101 ACGTTTCTGAAGTAACTGAACTCCGTAAACAGCTTCGCGAAGCTAACGTA    150

BSNT_00205___    151 GAGTTCAAAGTTTACAAAAATACGATGACTCGCCGTGCGGTTGAACAAGC    200
                     |||||||||||.||||||||.||.||||||||||||||||||||||||||
RBAM_001290__    151 GAGTTCAAAGTGTACAAAAACACAATGACTCGCCGTGCGGTTGAACAAGC    200

BSNT_00205___    201 TGAGCTTAATGGTTTGAATGATTTCTTAACTGGACCGAACGCGATCGCAT    250
                     |||.|||.||||||||||||||.||||||||||||||||.||||||||||
RBAM_001290__    201 TGAACTTGATGGTTTGAATGATGTCTTAACTGGACCGAATGCGATCGCAT    250

BSNT_00205___    251 TCAGCACTGAAGATGTTGTCGCTCCGGCTAAAGTTCTTAATGACTTCGCT    300
                     ||||.||||||||||||.||||||||||.|||||||||||.||.|||||.
RBAM_001290__    251 TCAGTACTGAAGATGTTATCGCTCCGGCAAAAGTTCTTAACGAGTTCGCG    300

BSNT_00205___    301 AAAAATCACGAAGCTCTTGAAATCAAAGCTGGCGTTATCGAAGGTAAAGT    350
                     |||||||||||||||||.|||||||||||.||||||||||||||.|||||
RBAM_001290__    301 AAAAATCACGAAGCTCTGGAAATCAAAGCGGGCGTTATCGAAGGAAAAGT    350

BSNT_00205___    351 TTCTACTGTTGAAGAAGTGAAAGCTCTTGCTGAACTTCCATCACGCGAAG    400
                     .|||.||||||||||||||||||||||||||||||||||.||||||||.|
RBAM_001290__    351 ATCTTCTGTTGAAGAAGTGAAAGCTCTTGCTGAACTTCCTTCACGCGATG    400

BSNT_00205___    401 GCTTGCTTTCTATGTTGCTTAGCGTACTTCAAGCTCCAGTTCGCAACCTT    450
                     ||||.|||||||||||||||||||||||||||||||||||||||||||||
RBAM_001290__    401 GCTTACTTTCTATGTTGCTTAGCGTACTTCAAGCTCCAGTTCGCAACCTT    450

BSNT_00205___    451 GCTTTTGCTGCAAAAGCTGTGGCAGAACAAAAGGAAGAACAAGGCGCTTA    500
                     ||..||||.||.|||||.||.|||||.|||||||||||||||||||||||
RBAM_001290__    451 GCACTTGCAGCTAAAGCAGTTGCAGACCAAAAGGAAGAACAAGGCGCTTA    500

BSNT_00205___    501 A    501
                     |
RBAM_001290__    501 A    501


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